Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 78.78 | 82.31 |
| TraesCS4B01G285800.1 | Wheat | peroxisome, plasma membrane, vacuole | 76.07 | 78.19 |
| TraesCS4D01G284600.1 | Wheat | peroxisome, plasma membrane, vacuole | 76.07 | 78.01 |
| TraesCS4B01G285500.1 | Wheat | plasma membrane | 75.85 | 77.96 |
| TraesCS4A01G018500.1 | Wheat | peroxisome, plasma membrane, vacuole | 75.85 | 77.96 |
| TraesCS4A01G018400.1 | Wheat | peroxisome, plasma membrane, vacuole | 75.17 | 77.26 |
| TraesCS4A01G018300.1 | Wheat | peroxisome, plasma membrane, vacuole | 67.72 | 73.89 |
| TraesCS4D01G284500.1 | Wheat | plasma membrane | 58.69 | 70.65 |
| EES01014 | Sorghum | plasma membrane | 63.43 | 64.75 |
| GSMUA_Achr6P35440_001 | Banana | plasma membrane | 51.24 | 52.18 |
| VIT_01s0026g02500.t01 | Wine grape | plasma membrane | 47.86 | 51.58 |
| PGSC0003DMT400019843 | Potato | peroxisome, plasma membrane, plastid, vacuole | 16.7 | 49.33 |
| EES10943 | Sorghum | cytosol, peroxisome, plasma membrane | 51.02 | 48.92 |
| Solyc05g050440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 18.74 | 48.54 |
| Solyc05g053970.2.1 | Tomato | plasma membrane | 38.15 | 48.01 |
| Solyc06g061270.1.1 | Tomato | cytosol, plasma membrane | 22.57 | 47.62 |
| KXG19641 | Sorghum | plasma membrane | 42.21 | 46.87 |
| Zm00001d044387_P001 | Maize | nucleus | 90.29 | 46.73 |
| KRG89633 | Soybean | plasma membrane | 40.63 | 44.23 |
| Solyc06g061260.1.1 | Tomato | plasma membrane | 18.96 | 43.52 |
| PGSC0003DMT400082135 | Potato | plasma membrane | 9.93 | 43.14 |
| EES07657 | Sorghum | plasma membrane | 34.99 | 29.69 |
| EES06091 | Sorghum | plasma membrane | 38.15 | 29.34 |
| EES07655 | Sorghum | plasma membrane | 36.34 | 29.22 |
| EER89806 | Sorghum | cytosol, nucleus, plasma membrane | 35.89 | 27.85 |
| EES17245 | Sorghum | cytosol, peroxisome, plasma membrane | 34.31 | 26.39 |
| KXG25873 | Sorghum | plasma membrane | 37.92 | 25.53 |
| EES07473 | Sorghum | plasma membrane | 23.25 | 24.18 |
| EER98235 | Sorghum | plastid | 22.8 | 23.49 |
| OQU82139 | Sorghum | peroxisome | 22.57 | 23.31 |
| EER93207 | Sorghum | plasma membrane | 21.44 | 22.3 |
| EES12671 | Sorghum | plastid | 23.93 | 21.37 |
Protein Annotations
| EnsemblPlants:OQU87120 | EnsemblPlantsGene:SORBI_3003G207900 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF297 | PFAM:PF01490 | ProteinID:OQU87118.1 | ProteinID:OQU87119.1 | ProteinID:OQU87120 |
| ProteinID:OQU87120.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0009DC8673 | UniProt:A0A1W0VYB4 | MapMan:24.2.3.4.7 |
Description
hypothetical protein
Coordinates
chr3:+:53916579..53921201
Molecular Weight (calculated)
46669.6 Da
IEP (calculated)
8.661
GRAVY (calculated)
0.750
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGQNTCEAA VLPVSTLSEP LLVGKAADLA TAGDDLEAQL TSYRATGGAS FSRTCLNLTN AVSGIGVLSM PYAVAQGGWL SLLLFALVGA VCYYTGTLIE
101: RCMRADPGAI ASYPDIGKFA FGAAGRRAIA FFMYVELYLV AISFLVLEGD NLDKLFPGSS VHLMGMGGGY RLQGKQLFIA LAAAVVLPTT WLKNLGVLAY
201: VSAVGLVASA VLTASLVWAG VAETGGFRRN STSVLNLGGL PTSLGLYFVC FTGHAVFPTI YSSMKNNRRF SKVLLISSVL CSVNYGLTAV LGYMIYGDDV
301: QSQVTLNLPS GKLYTKVAIV TTLINPLAKY ALLVAPITAA IEERFSLPAG STPARVSIST VVVVSTAVVA STVPFFGYLM SFIGSFLSVM ATVIFPCLCF
401: LKIYRAEGIR RAEVTAIVGI LMMGVFVAVT GTYTSLQQII SAF
101: RCMRADPGAI ASYPDIGKFA FGAAGRRAIA FFMYVELYLV AISFLVLEGD NLDKLFPGSS VHLMGMGGGY RLQGKQLFIA LAAAVVLPTT WLKNLGVLAY
201: VSAVGLVASA VLTASLVWAG VAETGGFRRN STSVLNLGGL PTSLGLYFVC FTGHAVFPTI YSSMKNNRRF SKVLLISSVL CSVNYGLTAV LGYMIYGDDV
301: QSQVTLNLPS GKLYTKVAIV TTLINPLAKY ALLVAPITAA IEERFSLPAG STPARVSIST VVVVSTAVVA STVPFFGYLM SFIGSFLSVM ATVIFPCLCF
401: LKIYRAEGIR RAEVTAIVGI LMMGVFVAVT GTYTSLQQII SAF
001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
Arabidopsis Description
AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.