CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
golgi 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05123

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65990.1	EES05123	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017557_P001	Maize	plastid	95.07	93.75
TraesCS6B01G271500.1	Wheat	plasma membrane	84.51	85.51
TraesCS6A01G254100.1	Wheat	plasma membrane	84.51	85.51
HORVU6Hr1G064740.1	Barley	plasma membrane	84.51	85.51
TraesCS6D01G235500.1	Wheat	plasma membrane	84.27	85.27
Os02t0670900-02	Rice	endoplasmic reticulum, plasma membrane, plastid	87.56	76.59
OQU82139	Sorghum	peroxisome	75.12	74.59
GSMUA_Achr1P02810_001	Banana	cytosol, plasma membrane, vacuole	63.38	68.53
EES12671	Sorghum	plastid	78.87	67.74
GSMUA_Achr5P11060_001	Banana	plasma membrane	59.86	64.39
GSMUA_Achr4P25490_001	Banana	plasma membrane	57.98	63.01
GSMUA_AchrUn_...	Banana	plasma membrane, plastid, vacuole	60.56	61.72
PGSC0003DMT400045065	Potato	plasma membrane, plastid	60.8	61.52
VIT_03s0038g03900.t01	Wine grape	plasma membrane	61.5	61.5
CDY70145	Canola	plasma membrane	57.98	61.29
CDY21456	Canola	plasma membrane	57.75	61.04
AT2G42005.1	Thale cress	plasma membrane	58.92	60.77
Bra000591.1-P	Field mustard	plasma membrane	57.51	60.64
VIT_07s0031g02140.t01	Wine grape	plasma membrane	59.86	60.43
PGSC0003DMT400086252	Potato	plasma membrane	59.39	59.53
Solyc02g082510.1.1	Tomato	plasma membrane	59.15	59.29
PGSC0003DMT400048045	Potato	plasma membrane	59.15	59.02
Solyc03g032090.1.1	Tomato	plasma membrane	58.92	58.78
Bra029326.1-P	Field mustard	peroxisome	57.51	57.24
AT4G38250.1	Thale cress	plasma membrane	58.45	57.11
CDY42861	Canola	peroxisome	57.28	57.01
PGSC0003DMT400094217	Potato	plasma membrane	56.34	56.87
CDY47026	Canola	peroxisome, plastid	57.04	56.38
CDY59097	Canola	plastid	58.45	56.21
AT5G65990.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	56.1	55.97
Bra033558.1-P	Field mustard	plasma membrane	46.71	55.59
CDY54797	Canola	plastid	57.98	55.51
KRH39423	Soybean	plasma membrane	55.4	55.14
Solyc02g082520.1.1	Tomato	cytosol, peroxisome, plasma membrane	51.88	52.74
Solyc10g048180.1.1	Tomato	plasma membrane	52.35	52.22
KRH28932	Soybean	cytosol, plasma membrane	44.13	52.22
PGSC0003DMT400033422	Potato	plasma membrane	52.58	51.85
EER98235	Sorghum	plastid	38.26	37.91
EER93207	Sorghum	plasma membrane	34.51	34.51
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	24.18	23.25
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	25.12	23.16
KXG19641	Sorghum	plasma membrane	21.13	22.56
EES01014	Sorghum	plasma membrane	21.36	20.97
EES07657	Sorghum	plasma membrane	24.18	19.73
EER89806	Sorghum	cytosol, nucleus, plasma membrane	23.71	17.69
EES07655	Sorghum	plasma membrane	22.54	17.42
EES06091	Sorghum	plasma membrane	23.47	17.36
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	23.47	17.36
KXG25873	Sorghum	plasma membrane	23.71	15.35

Protein Annotations

MapMan:24.2.3.4.4	EntrezGene:8073916	InterPro:AA_transpt_TM	UniProt:C5Y1B3	EnsemblPlants:EES07473	ProteinID:EES07473
ProteinID:EES07473.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0008150
GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF259
EnsemblPlantsGene:SORBI_3004G285800	unigene:Sbi.11549	TMHMM:TMhelix	UniParc:UPI0001A862A4	RefSeq:XP_002454497.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:62832524..62834175

Molecular Weight (calculated)

45054.9 Da

IEP (calculated)

7.247

GRAVY (calculated)

0.846

Length

426 amino acids

Sequence
(BLAST)

001: MGFGMGNNNG ASSSSSRLDP APLLPHHGSG SREVGLSSQP KTFANVFIAV VGAGVLGLPY TFSHTGWAAG TLLLFSVAAL TFYCMMLLVA CRRRLADEHP
101: KIASFGDLGD AVFGAHGRFA VDVMLVLSQV SFCVGYLIFI SNTMAHLYPI TAPSSSALLS PKALVIWAML PFQLGLNSIK TLTLLAPLSI FADVVDLGAM
201: GVVLGQDVAA WVAKPVPVAA FGGPAALLYG LGVSVYAFEG VGMVLPLEAE AANKKKFGVT LGLSMAFIAV MYGLFGVMGY VAFGDATRDI ITTNLGAGWL
301: SAAVQLGLCI NLFFTMPVMM NPVYEVAERL LHGKRYCWWL RWLLVIVVGL AAMYVPNFTD FLALVGSSVC VLLGFVLPAS FHLKVFGGEM EWPGVVSDVL
401: LVVIGLSLAV FGTYTSLLQI FHSSSA

Best Arabidopsis Sequence Match ( AT2G42005.1 )
(BLAST)

001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE

Arabidopsis Description

AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.