CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0597400-00	Rice	cytosol, peroxisome, plasma membrane	71.89	70.43
Os05t0364700-00	Rice	extracellular	23.27	65.58
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	64.75	63.43
GSMUA_Achr6P35440_001	Banana	plasma membrane	50.23	50.11
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	17.05	49.33
VIT_01s0026g02500.t01	Wine grape	plasma membrane	46.54	49.15
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	51.61	48.48
Solyc05g053970.2.1	Tomato	plasma membrane	37.1	45.74
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	22.12	45.71
KXG19641	Sorghum	plasma membrane	41.94	45.61
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	17.74	45.03
PGSC0003DMT400082135	Potato	plasma membrane	10.14	43.14
Solyc06g061260.1.1	Tomato	plasma membrane	19.12	43.01
KRG89633	Soybean	plasma membrane	39.4	42.01
EES07657	Sorghum	plasma membrane	35.02	29.12
EES07655	Sorghum	plasma membrane	35.94	28.31
EES06091	Sorghum	plasma membrane	37.1	27.95
EER89806	Sorghum	cytosol, nucleus, plasma membrane	34.56	26.27
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	34.79	26.22
KXG25873	Sorghum	plasma membrane	37.1	24.47
EER93207	Sorghum	plasma membrane	22.58	23.0
EES07473	Sorghum	plasma membrane	20.97	21.36
EER98235	Sorghum	plastid	20.97	21.16
OQU82139	Sorghum	peroxisome	20.74	20.98
EES12671	Sorghum	plastid	21.43	18.75

Protein Annotations

MapMan:24.2.3.4.7	EntrezGene:8082490	InterPro:AA_transpt_TM	UniProt:C5XQ69	EnsemblPlants:EES01014	ProteinID:EES01014
ProteinID:EES01014.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490	PANTHER:PTHR22950
PANTHER:PTHR22950:SF297	EnsemblPlantsGene:SORBI_3003G208000	TMHMM:TMhelix	UniParc:UPI0001A84998	RefSeq:XP_002455894.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:53947100..53949012

Molecular Weight (calculated)

45580.1 Da

IEP (calculated)

8.184

GRAVY (calculated)

0.730

Length

434 amino acids

Sequence
(BLAST)

001: MAAAGSPLDE PFLVPGKDRE QRGGADDVAN IEAQLLLHHD TGASFWRSCL NLSNIISGVG LLSVPYALAQ GGWLSLVLFA VVGAVCYYTG ELIARCMRAG
101: GGGGVSAVRS YPDIGQLAFG QPGRKTIGAI MYAELYLVAV SFLILEGDNL DKLLPGTAVG LPGGYVLRGK QLFTLVAAVV ILPTTWLRDL SVLAYVSAVG
201: LVASVALTAS LVWAGVAEHG FHAKDANVFS LAGLPTSLSL YFVCFSGHGV FPTVYTSMRD NNGFTKVLLF SSVLCSLNYA LTAVLGYMIY GDDVKSLVTL
301: NLPTGKVYTR IAILTTLITP LAKYALVIQP ITTGMEEKLS SSSRGSLARA AISTGVVVST VVAACTVPFF GYLMSFIGSS LNVTVAVLFP CLSYLMIGRV
401: RRAEAAGIVA ILVFGVCVAV LGTYTSLHQI VSTF

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.