CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037229_P001	Maize	plasma membrane	94.74	94.74
TraesCS7A01G188100.1	Wheat	plasma membrane	80.2	80.2
TraesCS7B01G093100.1	Wheat	plasma membrane	79.95	79.95
TraesCS7D01G189100.1	Wheat	plasma membrane	79.7	79.7
HORVU7Hr1G038300.27	Barley	plasma membrane	79.7	79.5
Os06t0228500-01	Rice	plasma membrane	78.2	75.54
GSMUA_Achr7P18140_001	Banana	plasma membrane	63.16	59.29
VIT_01s0026g02500.t01	Wine grape	plasma membrane	58.9	57.18
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	30.08	57.14
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	24.31	56.73
Solyc05g053970.2.1	Tomato	plasma membrane	48.12	54.55
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	19.8	52.67
KRG89633	Soybean	plasma membrane	52.13	51.11
Solyc06g061260.1.1	Tomato	plasma membrane	22.81	47.15
PGSC0003DMT400082135	Potato	plasma membrane	11.78	46.08
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	52.88	45.67
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	46.87	42.21
EES01014	Sorghum	plasma membrane	45.61	41.94
EES07655	Sorghum	plasma membrane	45.86	33.21
EES07657	Sorghum	plasma membrane	42.61	32.57
EES06091	Sorghum	plasma membrane	45.61	31.6
EER89806	Sorghum	cytosol, nucleus, plasma membrane	42.86	29.95
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	42.61	29.51
KXG25873	Sorghum	plasma membrane	43.61	26.44
EES07473	Sorghum	plasma membrane	22.56	21.13
EER98235	Sorghum	plastid	22.56	20.93
OQU82139	Sorghum	peroxisome	21.3	19.81
EER93207	Sorghum	plasma membrane	20.8	19.48
EES12671	Sorghum	plastid	22.56	18.15

Protein Annotations

EnsemblPlants:KXG19641	EnsemblPlantsGene:SORBI_3010G092700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	PFAM:PF01490	ProteinID:KXG19641	ProteinID:KXG19641.1	SEG:seg
TMHMM:TMhelix	unigene:Sbi.8824	UniParc:UPI0003C6F4D3	UniProt:A0A194YJ59	MapMan:24.2.3.4.7	:

Description

hypothetical protein

Coordinates

chr10:+:8247202..8253681

Molecular Weight (calculated)

43229.1 Da

IEP (calculated)

9.299

GRAVY (calculated)

0.855

Length

399 amino acids

Sequence
(BLAST)

001: MENNTPPKSG TGFFKTCFNG VNALSGVGIL SIPYALSQGG WLSLLIFLTI AIICFYTGIL LQRCIDSSSL VKTYPDIGEL AFGRKGKIIV AIFLYLELYL
101: VAIDFLILEG DNLEKLFPNA NFHAAGLKVG SKQGFVLIFS LLVLPTTWLR SLNMLAYVAL GGVMASVILI ASVLWVGTFD GVGFHKKGVP VDWSGMPTAM
201: SLYAFCFSGH AVFPMIYTGM RNRKTFPTVL LICFIICTLS YGLTGVVGYL MFGESLSSQV TLNLPSNRFA SNVAIYTTLI NPFTKFALLI TPIAEAIEDK
301: LHVGKNRTVS IVIRTALVVS TTIVALAVPF FAYVVALTGS FLSSTVTMLI PCVCYLKISS RTSRNLRLEL VVCLVIIMIG AGVIVVGTYS SLKQIVNSF

Best Arabidopsis Sequence Match ( AT5G15240.1 )
(BLAST)

001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF

Arabidopsis Description

AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.