Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- golgi 2
- extracellular 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G189100.1 | Wheat | plasma membrane | 75.79 | 78.45 |
| TraesCS7A01G188100.1 | Wheat | plasma membrane | 75.79 | 78.45 |
| HORVU7Hr1G038300.27 | Barley | plasma membrane | 75.79 | 78.25 |
| KXG19641 | Sorghum | plasma membrane | 75.54 | 78.2 |
| TraesCS7B01G093100.1 | Wheat | plasma membrane | 75.3 | 77.94 |
| Zm00001d037229_P001 | Maize | plasma membrane | 75.06 | 77.69 |
| GSMUA_Achr7P18140_001 | Banana | plasma membrane | 61.99 | 60.24 |
| Solyc05g050440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 24.7 | 59.65 |
| Solyc06g061270.1.1 | Tomato | cytosol, plasma membrane | 30.02 | 59.05 |
| Solyc05g053970.2.1 | Tomato | plasma membrane | 48.43 | 56.82 |
| VIT_01s0026g02500.t01 | Wine grape | plasma membrane | 56.17 | 56.45 |
| Os04t0460200-01 | Rice | endoplasmic reticulum | 32.2 | 54.06 |
| PGSC0003DMT400019843 | Potato | peroxisome, plasma membrane, plastid, vacuole | 19.13 | 52.67 |
| KRG89633 | Soybean | plasma membrane | 48.43 | 49.14 |
| Solyc06g061260.1.1 | Tomato | plasma membrane | 22.76 | 48.7 |
| Os05t0364700-00 | Rice | extracellular | 17.68 | 47.4 |
| Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 48.18 | 46.93 |
| Os01t0597400-00 | Rice | cytosol, peroxisome, plasma membrane | 47.7 | 44.47 |
| PGSC0003DMT400082135 | Potato | plasma membrane | 10.65 | 43.14 |
| Os02t0101000-01 | Rice | cytosol, nucleus, plasma membrane | 44.31 | 32.05 |
| Os04t0201800-00 | Rice | plasma membrane, plastid | 30.27 | 31.09 |
| Os12t0574000-01 | Rice | plasma membrane | 41.89 | 29.12 |
| Os11t0298000-00 | Rice | mitochondrion, plastid | 32.2 | 27.54 |
| Os03t0817200-01 | Rice | plasma membrane | 25.42 | 25.12 |
| Os07t0231400-01 | Rice | plasma membrane | 19.37 | 22.16 |
| Os02t0788800-01 | Rice | cytosol, peroxisome, plasma membrane | 17.19 | 21.98 |
| Os04t0565500-01 | Rice | cytosol, plasma membrane, plastid | 22.52 | 21.88 |
| Os02t0670900-02 | Rice | endoplasmic reticulum, plasma membrane, plastid | 23.0 | 19.51 |
| Os04t0460300-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.3.4.7 | EntrezGene:4340559 | InterPro:AA_transpt_TM | EMBL:AK107472 | ProteinID:BAD37258.1 | ProteinID:BAD37472.1 |
| ProteinID:BAF19122.1 | ProteinID:BAS96886.1 | ProteinID:EEE65374.1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:Os06g0228500 | EnsemblPlants:Os06t0228500-01 | PFAM:PF01490 | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF465 | UniProt:Q67WJ7 |
| TMHMM:TMhelix | UniParc:UPI0000426211 | RefSeq:XP_015641510.1 | SEG:seg | : | : |
Description
amino acid transporter-like 12Amino acid transporter, transmembrane domain containing protein. (Os06t0228500-01)
Coordinates
chr6:+:6678245..6680823
Molecular Weight (calculated)
43795.6 Da
IEP (calculated)
9.411
GRAVY (calculated)
0.875
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: METNTPPKSG TSFLKTCFNG VNALSGVGIL SMPYALSQGG WLSLAIFITI AAICFYTGIL LQRCIDSSSL VKTYPDIGEL AFGRKGRIAV AAFMYLELYL
101: VAIDFLILEG DNLEKLFPNA SFFSSFHRIA GGTRQGFVLL FALLVLPTTW FRSLDLLAYV SLGGVLASAI LVASVLWVGA ADGVGFREGG VAVRWGGVPT
201: AMSLYAFCFS GHAVFPMIYT GMRNRRMFPH VLLICFIICT LAYGVMGVIG YLMYGGSLRS QVTLNLPARK LSSSIAIYTT LINPFTKFAL LITPIAEAIE
301: GVLGLGTATT GGKPAQYRAA AVSVSVRTAL VVSTTAVALA VPFFAYVVAL TGSFLSATAT MLLPCACYLR ISSRASGKLG VLEIVACVGI IVLGLGVIVI
401: GTYSSLKQIV QSF
101: VAIDFLILEG DNLEKLFPNA SFFSSFHRIA GGTRQGFVLL FALLVLPTTW FRSLDLLAYV SLGGVLASAI LVASVLWVGA ADGVGFREGG VAVRWGGVPT
201: AMSLYAFCFS GHAVFPMIYT GMRNRRMFPH VLLICFIICT LAYGVMGVIG YLMYGGSLRS QVTLNLPARK LSSSIAIYTT LINPFTKFAL LITPIAEAIE
301: GVLGLGTATT GGKPAQYRAA AVSVSVRTAL VVSTTAVALA VPFFAYVVAL TGSFLSATAT MLLPCACYLR ISSRASGKLG VLEIVACVGI IVLGLGVIVI
401: GTYSSLKQIV QSF
001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
Arabidopsis Description
AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.