Factsheet for Os04t0201800-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g063030.2.1	Tomato	plasma membrane	35.57	60.85
Zm00001d004340_P002	Maize	plasma membrane	78.86	55.61
TraesCS2B01G065200.1	Wheat	cytosol, peroxisome, plasma membrane	76.87	55.48
TraesCS2A01G052500.1	Wheat	plasma membrane	76.12	55.23
TraesCSU01G023100.1	Wheat	cytosol, peroxisome, plasma membrane	76.37	55.12
HORVU2Hr1G008090.4	Barley	cytosol, peroxisome, plasma membrane	76.37	54.63
Os02t0101000-01	Rice	cytosol, nucleus, plasma membrane	73.88	52.01
Bra007103.1-P	Field mustard	plasma membrane	47.26	48.22
PGSC0003DMT400036273	Potato	cytosol, nucleus, plasma membrane	53.23	48.2
Bra005061.1-P	Field mustard	cytosol, nucleus, plasma membrane	55.22	48.16
KXG25873	Sorghum	plasma membrane	78.61	48.02
Os04t0460200-01	Rice	endoplasmic reticulum	27.61	45.12
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	62.19	44.41
GSMUA_Achr5P10650_001	Banana	cytosol, nucleus, plasma membrane	58.46	42.42
CDY18351	Canola	plastid	53.48	42.24
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	58.46	41.74
CDX78269	Canola	plasma membrane	54.23	41.13
Solyc11g008440.1.1	Tomato	cytosol, nucleus, plasma membrane	56.72	41.08
CDY44630	Canola	plasma membrane	55.47	40.62
CDX73443	Canola	cytosol, nucleus, plasma membrane	54.23	40.6
AT2G39130.2	Thale cress	cytosol, nucleus, plasma membrane	55.47	40.55
CDX74865	Canola	plasma membrane	55.22	40.22
CDX93284	Canola	cytosol, nucleus, plasma membrane	53.73	39.56
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	53.48	39.38
AT3G54830.1	Thale cress	nucleus	52.49	38.64
PGSC0003DMT400019190	Potato	cytosol, nucleus, plasma membrane	56.47	37.71
Os05t0364700-00	Rice	extracellular	14.18	37.01
Solyc03g063050.1.1	Tomato	extracellular, plasma membrane	24.13	36.47
Os06t0228500-01	Rice	plasma membrane	31.09	30.27
Os12t0574000-01	Rice	plasma membrane	43.53	29.46
KRG99991	Soybean	cytosol, nucleus, peroxisome	20.65	29.12
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	23.38	29.1
Os01t0597600-01	Rice	peroxisome, plasma membrane, vacuole	29.35	27.83
Os01t0597400-00	Rice	cytosol, peroxisome, plasma membrane	29.35	26.64
Os11t0298000-00	Rice	mitochondrion, plastid	26.87	22.36
Os03t0817200-01	Rice	plasma membrane	17.66	16.99
Os07t0231400-01	Rice	plasma membrane	14.43	16.07
Os04t0565500-01	Rice	cytosol, plasma membrane, plastid	15.67	14.82
Os02t0670900-02	Rice	endoplasmic reticulum, plasma membrane, plastid	15.92	13.14
Solyc03g063040.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	0.5	1.63
Os04t0460300-01	Rice	plastid	0.0	0.0

Protein Annotations

MapMan:24.2.3.4.7	UniProt:A0A0P0W7I9	InterPro:AA_transpt_TM	ProteinID:BAS88068.1	GO:GO:0003333	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os04g0201800	EnsemblPlants:Os04t0201800-00
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF240	TMHMM:TMhelix	UniParc:UPI000393A3DC	SEG:seg

Description

Similar to H0512B01.7 protein. (Os04t0201800-00)

Coordinates

chr4:-:6912953..6925360

Molecular Weight (calculated)

43495.1 Da

IEP (calculated)

6.915

GRAVY (calculated)

0.375

Length

402 amino acids

Sequence
(BLAST)

001: MYSSVQSPNL SFLGTPTLSR LSNSFLTASF RGKPPEIISG LIKPLLPTTA AADDEGDRRQ QQHEDGRKSS QYLLPPRRPS SLQKIPEDQK PLVVGHHEVG
101: PYRQCTYTQG VLNGVNVLCG VGVLSTPYAV KQGGWLGLII LALLAVLAWY TGILLKRCLD SKEGLETYPD IGHAAFGTTG RIVISVILYM ELFNIGNIFI
201: GPNVSLQACC IEYLILESDN LSKLFPNAHL TIGTFTINAH ILFAILTTLI VMPTTWLRDL SCLSFISAGG VIASIVIVAC LFWVGLVDHI EAKDEGTALN
301: LPGIPIAVGL YGYCYSGHGV FPNIYSSMKK RSQFPAVIFT CIALSTVLFA GAAIMGYIMF GESTESQFTL NLPSNLVASK IAVWTTASMD STLVRTPGLD
401: IE

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.