Factsheet for Bra005061.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74865	Canola	plasma membrane	99.13	82.79
AT2G39130.2	Thale cress	cytosol, nucleus, plasma membrane	91.76	76.91
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	89.8	75.82
Solyc03g063030.2.1	Tomato	plasma membrane	36.01	70.64
PGSC0003DMT400036273	Potato	cytosol, nucleus, plasma membrane	62.04	64.41
Bra007103.1-P	Field mustard	plasma membrane	53.8	62.94
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	71.58	58.61
KRG91942	Soybean	plasma membrane	68.55	58.09
Solyc11g008440.1.1	Tomato	cytosol, nucleus, plasma membrane	68.55	56.94
KRH34828	Soybean	plasma membrane	67.46	55.44
Os04t0201800-00	Rice	plasma membrane, plastid	48.16	55.22
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	65.94	54.0
GSMUA_Achr5P10650_001	Banana	cytosol, nucleus, plasma membrane	62.91	52.35
PGSC0003DMT400019190	Potato	cytosol, nucleus, plasma membrane	65.94	50.5
Solyc03g063050.1.1	Tomato	extracellular, plasma membrane	29.07	50.38
Zm00001d004340_P002	Maize	plasma membrane	58.79	47.54
TraesCS2A01G052500.1	Wheat	plasma membrane	57.05	47.47
TraesCSU01G023100.1	Wheat	cytosol, peroxisome, plasma membrane	57.27	47.4
TraesCS2B01G065200.1	Wheat	cytosol, peroxisome, plasma membrane	57.05	47.22
HORVU2Hr1G008090.4	Barley	cytosol, peroxisome, plasma membrane	56.83	46.62
Os02t0101000-01	Rice	cytosol, nucleus, plasma membrane	57.48	46.41
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	52.49	46.01
Zm00001d043640_P001	Maize	plasma membrane	16.7	45.56
TraesCS6B01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	54.88	44.94
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	55.1	44.8
EES06091	Sorghum	plasma membrane	55.97	44.79
KRH38592	Soybean	endoplasmic reticulum	23.21	44.77
TraesCS6A01G002400.1	Wheat	cytosol, nucleus, plasma membrane	54.88	44.7
TraesCS6D01G003200.1	Wheat	cytosol, nucleus, plasma membrane	55.1	44.56
EER89806	Sorghum	cytosol, nucleus, plasma membrane	54.01	43.61
HORVU6Hr1G001480.1	Barley	plasma membrane	54.66	42.42
Bra005712.1-P	Field mustard	plasma membrane	45.12	41.43
KXG25873	Sorghum	plasma membrane	58.35	40.88
Bra001315.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.42	40.53
Bra009608.1-P	Field mustard	plasma membrane	44.9	37.84
Bra000217.1-P	Field mustard	plasma membrane	39.7	35.19
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.7	34.59
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.48	34.08
Bra025369.1-P	Field mustard	plasma membrane	25.81	29.38
Bra033075.1-P	Field mustard	plasma membrane	25.81	29.38
Bra023581.1-P	Field mustard	plasma membrane	18.0	26.35
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	8.46	25.49
Bra000591.1-P	Field mustard	plasma membrane	17.14	19.55
Bra029326.1-P	Field mustard	peroxisome	18.0	19.39
Bra034803.1-P	Field mustard	plasma membrane	17.57	18.97
Bra001425.1-P	Field mustard	plasma membrane	17.14	18.54
Solyc03g063040.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	4.77	17.89
Bra033558.1-P	Field mustard	plasma membrane	12.58	16.2
KRG99573	Soybean	cytosol, nucleus, plasma membrane	3.25	14.02

Protein Annotations

EnsemblPlants:Bra005061.1	EnsemblPlants:Bra005061.1-P	EnsemblPlantsGene:Bra005061	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF240	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025475A1	UniProt:M4CLH4	MapMan:24.2.3.4.7	:	:	:

Description

AT2G39130 (E=1e-212) | amino acid transporter family protein

Coordinates

chrA05:+:3235796..3239634

Molecular Weight (calculated)

50326.3 Da

IEP (calculated)

4.609

GRAVY (calculated)

0.198

Length

461 amino acids

Sequence
(BLAST)

001: MNHVPSDQSF YIESEEEDDR KDYEEEDDDD QSHSDSSDAN DDNQTHTKPS SYTTAWPQSY RQSIDLYSSV PSPNIGFLGN NSVTRFGSSF LSSSLIRRHT
101: PESLPAVTKP LLEADEQALP PPPKHRLSSH GLLSPAPSRR GSMRKDEKVF MVSHEIPMSR NSSYGQAVLN GLNVLCGVGI LSTPYAAKEG GWLGLMILFI
201: YGLLSFYTGI LLRYCLDSES DLETYPDIGQ AAFGTTGRIF VSIVLYLELY ACCVEYIILE SDNLSSLFPN AAFGIGGFEL DARHLFAILT TLAVLPTVWL
301: RDLSVLSYIS AGGVIASVLV VLCLFWIGLV DEVGIHSKGT TLNLSTLPVA IGLYGYCYSG HAVFPNIYTS MAKPTQYPAV LLTCFGICTL MYAGVAVMGY
401: TMFGEATESQ FTLNLPQELV ATKIAVWTTM MLCVLIIIIG AISSVIGSYS ALSKIIQKLS S

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.