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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70145 Canola plasma membrane 99.01 99.26
AT2G42005.1 Thale cress plasma membrane 86.88 84.99
Bra033558.1-P Field mustard plasma membrane 66.58 75.14
VIT_03s0038g03900.t01 Wine grape plasma membrane 70.05 66.43
Bra029326.1-P Field mustard peroxisome 65.59 61.92
GSMUA_Achr1P02810_001 Banana cytosol, plasma membrane, vacuole 59.41 60.91
GSMUA_Achr5P11060_001 Banana plasma membrane 57.92 59.09
Solyc10g048180.1.1 Tomato plasma membrane 62.13 58.78
TraesCS6B01G271500.1 Wheat plasma membrane 60.64 58.19
TraesCS6D01G235500.1 Wheat plasma membrane 60.4 57.96
TraesCS6A01G254100.1 Wheat plasma membrane 60.4 57.96
HORVU6Hr1G064740.1 Barley plasma membrane 60.15 57.72
EES07473 Sorghum plasma membrane 60.64 57.51
Os04t0565500-01 Rice cytosol, plasma membrane, plastid 60.4 57.41
PGSC0003DMT400033422 Potato plasma membrane 61.14 57.18
GSMUA_Achr4P25490_001 Banana plasma membrane 55.45 57.14
TraesCS2B01G421800.1 Wheat plasma membrane 59.65 56.97
TraesCS2D01G400900.1 Wheat plasma membrane 59.65 56.97
TraesCS2A01G403800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 59.41 56.74
Zm00001d017557_P001 Maize plastid 60.64 56.71
GSMUA_AchrUn_... Banana plasma membrane, plastid, vacuole 58.66 56.7
OQU82139 Sorghum peroxisome 56.93 53.61
Os02t0670900-02 Rice endoplasmic reticulum, plasma membrane, plastid 61.14 50.72
EES12671 Sorghum plastid 60.64 49.4
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 59.9 48.89
Bra001425.1-P Field mustard plasma membrane 36.88 34.98
Bra034803.1-P Field mustard plasma membrane 36.39 34.43
Bra007103.1-P Field mustard plasma membrane 23.76 24.37
Bra025369.1-P Field mustard plasma membrane 23.27 23.21
Bra033075.1-P Field mustard plasma membrane 22.77 22.72
Bra004605.1-P Field mustard cytosol, nucleus, plasma membrane 26.24 20.04
Bra023581.1-P Field mustard plasma membrane 15.35 19.68
Bra000217.1-P Field mustard plasma membrane 25.25 19.62
Bra016949.1-P Field mustard cytosol, peroxisome, plasma membrane 25.74 19.48
Bra005712.1-P Field mustard plasma membrane 24.01 19.32
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 24.26 18.56
Bra009608.1-P Field mustard plasma membrane 24.75 18.28
Bra017088.1-P Field mustard cytosol, nucleus, plasma membrane 23.76 17.58
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 19.55 17.14
Protein Annotations
MapMan:24.2.3.4.4InterPro:AA_transpt_TMEnsemblPlantsGene:Bra000591EnsemblPlants:Bra000591.1EnsemblPlants:Bra000591.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0015175GO:GO:0015804GO:GO:0016020
GO:GO:0016021UniProt:M4C8R3PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF464TMHMM:TMhelix
UniParc:UPI0002540188SEG:seg::::
Description
AT2G42005 (E=1e-187) | amino acid transporter family protein
Coordinates
chrA03:-:11932856..11934070
Molecular Weight (calculated)
43814.0 Da
IEP (calculated)
7.699
GRAVY (calculated)
0.891
Length
404 amino acids
Sequence
(BLAST)
001: MGPAAREDTP LLGKERPLSS QFKTFANVFI AIVGAGVLGL RYAFKRTGWL MGVLTLFSVA ALITHCMMLL VPIRRKLGAA NIGSFGDLGF AVCGPLGRFL
101: VDILIILSQA GFCVGYLIFI GTTLANLFNP TTTLTLSHVS PKSLYIWGCF PFQLGLNSVK TLTHLAPLSI FADVVDLGAM AVVIVEDVKI AVEQRPDVVA
201: FGGMSVFFYG MGVAVYAFEG VGMVLPLESE MKDKEKFGKV LALSMGIIAL LFGAFGVLGY MAFGDETMDI ITANLGPGLV SSLVKLGLCI NLFFTFPLMM
301: NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPAL FHLMVFKDEI GWKQRTFNSG IVLLGLVLAV SGTWSSLSEI
401: FNWN
Best Arabidopsis Sequence Match ( AT2G42005.1 )
(BLAST)
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.