Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G38250.1 GSMUA_Achr4P10230_001 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P02810_001 Banana cytosol, plasma membrane, vacuole 85.61 86.04
GSMUA_AchrUn_... Banana plasma membrane, plastid, vacuole 81.06 76.79
GSMUA_Achr4P25490_001 Banana plasma membrane 71.72 72.45
Os04t0565500-01 Rice cytosol, plasma membrane, plastid 67.17 62.59
TraesCS6B01G271500.1 Wheat plasma membrane 66.16 62.23
TraesCS2B01G421800.1 Wheat plasma membrane 66.41 62.17
TraesCS2D01G400900.1 Wheat plasma membrane 66.41 62.17
TraesCS6A01G254100.1 Wheat plasma membrane 65.91 62.0
TraesCS6D01G235500.1 Wheat plasma membrane 65.91 62.0
HORVU6Hr1G064740.1 Barley plasma membrane 65.4 61.52
TraesCS2A01G403800.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 65.66 61.47
Zm00001d017557_P001 Maize plastid 65.91 60.42
EES07473 Sorghum plasma membrane 64.39 59.86
OQU82139 Sorghum peroxisome 64.39 59.44
CDY70145 Canola plasma membrane 59.6 58.56
CDY21456 Canola plasma membrane 59.34 58.31
VIT_07s0031g02140.t01 Wine grape plasma membrane 62.12 58.29
Bra000591.1-P Field mustard plasma membrane 59.09 57.92
AT2G42005.1 Thale cress plasma membrane 58.59 56.17
AT4G38250.1 Thale cress plasma membrane 61.11 55.5
VIT_03s0038g03900.t01 Wine grape plasma membrane 59.34 55.16
PGSC0003DMT400045065 Potato plasma membrane, plastid 58.59 55.11
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 68.43 54.75
CDY59097 Canola plastid 60.86 54.4
Solyc02g082510.1.1 Tomato plasma membrane 58.33 54.35
PGSC0003DMT400086252 Potato plasma membrane 58.08 54.12
EES12671 Sorghum plastid 67.68 54.03
PGSC0003DMT400048045 Potato plasma membrane 58.08 53.86
Solyc03g032090.1.1 Tomato plasma membrane 58.08 53.86
CDY54797 Canola plastid 60.1 53.48
Os02t0670900-02 Rice endoplasmic reticulum, plasma membrane, plastid 65.66 53.39
Bra029326.1-P Field mustard peroxisome 57.58 53.27
CDY42861 Canola peroxisome 57.32 53.04
PGSC0003DMT400094217 Potato plasma membrane 56.31 52.84
AT5G65990.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane, plastid 56.82 52.69
CDY47026 Canola peroxisome, plastid 56.82 52.2
Bra033558.1-P Field mustard plasma membrane 46.97 51.96
Solyc02g082520.1.1 Tomato cytosol, peroxisome, plasma membrane 54.29 51.31
KRH39423 Soybean plasma membrane 55.3 51.17
Solyc10g048180.1.1 Tomato plasma membrane 54.04 50.12
KRH28932 Soybean cytosol, plasma membrane 44.7 49.17
PGSC0003DMT400033422 Potato plasma membrane 52.78 48.38
GSMUA_Achr1P27880_001 Banana nucleus, peroxisome, plasma membrane 23.74 26.93
GSMUA_Achr7P18140_001 Banana plasma membrane 22.47 20.94
GSMUA_Achr6P35440_001 Banana plasma membrane 22.22 20.23
GSMUA_Achr10P... Banana plasma membrane 22.47 20.23
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 24.49 17.96
GSMUA_Achr6P34060_001 Banana plasma membrane 22.98 16.49
GSMUA_Achr1P03170_001 Banana cytosol, nucleus, plasma membrane 22.47 15.81
GSMUA_Achr5P10650_001 Banana cytosol, nucleus, plasma membrane 21.46 15.34
GSMUA_Achr6P06880_001 Banana mitochondrion, plasma membrane, plastid 18.18 15.22
Protein Annotations
EnsemblPlants:GSMUA_Achr5P11060_001EnsemblPlants:GSMUA_Achr5T11060_001EnsemblPlantsGene:GSMUA_Achr5G11060_001GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF259PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI000295A00BUniProt:M0SXI5MapMan:24.2.3.4.4:::
Description
Putative Proton-coupled amino acid transporter 3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G11060_001]
Coordinates
chr5:+:7978315..7979586
Molecular Weight (calculated)
41425.4 Da
IEP (calculated)
6.908
GRAVY (calculated)
0.926
Length
396 amino acids
Sequence
(BLAST)
001: MGFGNEASSS GYGLDASGPL IQVVGGDDHG RGLSSQPKTF ANVFISIVGA GVLGLPYAFR RTGWVAGALL LLAVAALTFH CMMLIVRTRR RLDLDRSAKI
101: ASFGDLGLAV SGPLGRLAVD VMIVLSQAGF CVGYLIFISS SLTNLLPVSL PLLPFLSSKA LYVLAMLPFQ LGLNSIRTLT LLAPFSIFAD VVDIGAMGVV
201: VVEDVSVMLT RPPPLHAFSA PSVLLYGAGV AVYAFEGIGM VVPLEAEAAE KSKFGRTLGL SMAFIALIYG LFGVLGYAAF GDETRDIITA NLGAGALTRW
301: LCGKMYCWWL RWALVAAVSL VATLVPNFAD FLSLVGGSVC VVLGFVLPAV FHFKVFSAEL GLAGATADIA IIVVGVALAI SGTWSSLMAI FNSEQA
Best Arabidopsis Sequence Match ( AT4G38250.1 )
(BLAST)
001: MGFQNEASSS SYTLKIPPPA REDSPLLGKG PPLSSQFKTF ANVFIAVVGA GVLGLPYAFK RTGWLMGVLL LVSVSVLTHH CMMLLVYTRR KLDSFNAGIS
101: KIGSFGDLGF AVCGSLGRIV VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC FPFQLGLNSI KTLTHLAPLS
201: IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD
301: IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE
401: MGWLQWSSDT AIVVLGVVLA VSGTWSSLSE IFSVKV
Arabidopsis Description
AVT3CAmino acid transporter AVT3C [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.