Factsheet for GSMUA_Achr7P18140_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G189100.1	Wheat	plasma membrane	61.18	65.16
HORVU7Hr1G038300.27	Barley	plasma membrane	60.94	64.75
TraesCS7B01G093100.1	Wheat	plasma membrane	60.71	64.66
TraesCS7A01G188100.1	Wheat	plasma membrane	60.71	64.66
KXG19641	Sorghum	plasma membrane	59.29	63.16
Zm00001d037229_P001	Maize	plasma membrane	58.35	62.16
Os06t0228500-01	Rice	plasma membrane	60.24	61.99
HORVU2Hr1G069080.4	Barley	cytosol, peroxisome, plasma membrane	53.65	56.02
TraesCS2A01G282000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	53.18	55.53
TraesCS2D01G280800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	53.18	55.53
TraesCS2B01G299200.1	Wheat	plasma membrane	52.71	55.04
TraesCS3B01G499000.1	Wheat	plasma membrane	50.35	52.32
GSMUA_Achr10P...	Banana	plasma membrane	53.65	51.82
GSMUA_Achr6P35440_001	Banana	plasma membrane	50.59	49.43
GSMUA_Achr5P10650_001	Banana	cytosol, nucleus, plasma membrane	42.82	32.85
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	41.41	32.59
GSMUA_Achr6P34060_001	Banana	plasma membrane	42.12	32.43
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	40.0	30.2
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	33.18	29.81
GSMUA_Achr4P25490_001	Banana	plasma membrane	21.18	22.96
GSMUA_Achr5P11060_001	Banana	plasma membrane	20.94	22.47
GSMUA_Achr1P02810_001	Banana	cytosol, plasma membrane, vacuole	20.71	22.34
GSMUA_AchrUn_...	Banana	plasma membrane, plastid, vacuole	20.47	20.81
GSMUA_Achr1P27880_001	Banana	nucleus, peroxisome, plasma membrane	16.71	20.34

Protein Annotations

EnsemblPlants:GSMUA_Achr7P18140_001	EnsemblPlants:GSMUA_Achr7T18140_001	EnsemblPlantsGene:GSMUA_Achr7G18140_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF465	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002969EFF	UniProt:M0TIK1	MapMan:24.2.3.4.7	:	:	:

Description

Putative Vacuolar amino acid transporter 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G18140_001]

Coordinates

chr7:+:20934275..20935889

Molecular Weight (calculated)

46566.3 Da

IEP (calculated)

9.020

GRAVY (calculated)

0.796

Length

425 amino acids

Sequence
(BLAST)

001: MECDLPPKTG TSFWRTSFHG VNALSGFGIL SIPYAVSQGG WLSMILLLTI AVVCCYTGIL LQRCMDSNSL VKTYPDIGEI ALGHKGRILV SVFLYLELYL
101: VATEFLILEG DNMEKLFPRK SFVIAGLKIG GKQAFILLGA FVILPTTWLR SLDLLSYVSL GGVLASLVVV ASVLWAGAVD GVGFHERGVL LNWTGIPTAV
201: SLYAFCYSGH AVFPTIYVPM KDRRMFPMVL FISFTLCTLN YSLMATVGYL MYGETLKSQI TLNLQAGKLS SKIAICTTLI TPFVKYALLV TPIARAIEDR
301: LHVSKHWSIS LVIRTGIVIT TVAVALSVPF FGDIVALTGS FLSSTATMVL PCVCYLKIFK NSRKWSYELL CIVAIIVAGS VVAVTGTYAS LKQIIQHLLH
401: ESASLLFLKM IIENIFISHS FKSIY

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.