Factsheet for TraesCS3B01G499000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G299200.1	Wheat	plasma membrane	78.24	78.62
TraesCS7B01G093100.1	Wheat	plasma membrane	60.88	62.41
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	27.63	53.81
VIT_01s0026g02500.t01	Wine grape	plasma membrane	52.32	52.07
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	21.52	51.46
GSMUA_Achr7P18140_001	Banana	plasma membrane	52.32	50.35
Solyc05g053970.2.1	Tomato	plasma membrane	42.54	49.43
KRG89633	Soybean	plasma membrane	47.43	47.67
TraesCS2B01G342900.1	Wheat	plasma membrane	49.14	47.29
TraesCS1B01G058900.1	Wheat	plasma membrane	48.17	46.03
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	16.87	46.0
TraesCS2B01G343300.2	Wheat	plasma membrane	48.41	45.0
TraesCS2B01G343200.2	Wheat	plasma membrane	47.92	43.36
TraesCS4B01G285800.1	Wheat	peroxisome, plasma membrane, vacuole	44.99	42.69
TraesCS4B01G285500.1	Wheat	plasma membrane	44.25	42.0
Solyc06g061260.1.1	Tomato	plasma membrane	19.8	41.97
PGSC0003DMT400082135	Potato	plasma membrane	9.54	38.24
TraesCS6B01G381900.1	Wheat	plasma membrane	38.39	30.72
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	40.34	30.67
TraesCS6B01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	40.83	29.66
TraesCS2B01G065200.1	Wheat	cytosol, peroxisome, plasma membrane	37.16	27.29
TraesCS5B01G084900.1	Wheat	plasma membrane	38.39	26.21
TraesCS4B01G074300.1	Wheat	plasma membrane	29.83	25.79
TraesCS5B01G485500.1	Wheat	plasma membrane	24.45	23.53
TraesCS5B01G485400.1	Wheat	plasma membrane	23.96	23.28
TraesCS6B01G271500.1	Wheat	plasma membrane	22.25	21.62
TraesCS5B01G173000.1	Wheat	plasma membrane	21.27	20.67
TraesCS2B01G421800.1	Wheat	plasma membrane	21.27	20.57
TraesCS2B01G297200.1	Wheat	plasma membrane	20.78	20.24

Protein Annotations

EnsemblPlants:TraesCS3B01G499000.1	EnsemblPlantsGene:TraesCS3B01G499000	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr3B:-:742446420..742447858

Molecular Weight (calculated)

43645.3 Da

IEP (calculated)

9.427

GRAVY (calculated)

0.725

Length

409 amino acids

Sequence
(BLAST)

001: MDTRSSTNIE PPPSSVKTSF LKTCFNGINA LSGIGLLSIP YALAQGGWLS LIVFLTIAVI CFYTGLLLQR CMDSSSLVHT YPDIGAHAFG RKGRFIVAAI
101: MYVELYLVAI DFLILEGDNL HKLFPAVSFR LGTLHIGGQQ AFVLAATLAV LPTTWFRNLN LLAYVAAGGA LASVILIGAV LWVGVLDGVG FHERGRLVHW
201: AGLPSTMSLY SFCFSGHAVF PMLYTGMKDR KRLPMVRTFT DRRTIACYGF MGVIGYLMYG DSLMSQITLN LPSSSVAAKV AIYSTLVNPL TKYALMLAPV
301: AEATESALGV SNSAVLGALV RTGLVVGTTV VAQAVPFFAD VVGLTGALFG CTTTMLLPCL CYLRVRSKIG GVIKTGLETA ACLAILAVGA VIVGFGTYSS
401: VKQIHQRLR

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.