Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4B01G285500.1 | Wheat | plasma membrane | 94.43 | 94.43 |
TraesCS4D01G284600.1 | Wheat | peroxisome, plasma membrane, vacuole | 93.74 | 93.52 |
TraesCS4A01G018400.1 | Wheat | peroxisome, plasma membrane, vacuole | 93.04 | 93.04 |
Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 77.96 | 79.25 |
OQU87120 | Sorghum | peroxisome, plasma membrane, vacuole | 78.19 | 76.07 |
TraesCS2B01G342900.1 | Wheat | plasma membrane | 51.28 | 52.0 |
TraesCS1B01G058900.1 | Wheat | plasma membrane | 51.28 | 51.64 |
TraesCS2B01G343300.2 | Wheat | plasma membrane | 52.44 | 51.36 |
GSMUA_Achr6P35440_001 | Banana | plasma membrane | 51.74 | 51.26 |
VIT_01s0026g02500.t01 | Wine grape | plasma membrane | 48.49 | 50.85 |
TraesCS2B01G343200.2 | Wheat | plasma membrane | 51.28 | 48.89 |
PGSC0003DMT400019843 | Potato | peroxisome, plasma membrane, plastid, vacuole | 16.94 | 48.67 |
TraesCS7B01G093100.1 | Wheat | plasma membrane | 44.32 | 47.87 |
Solyc05g053970.2.1 | Tomato | plasma membrane | 37.82 | 46.31 |
Solyc06g061270.1.1 | Tomato | cytosol, plasma membrane | 22.27 | 45.71 |
TraesCS2B01G299200.1 | Wheat | plasma membrane | 42.69 | 45.21 |
Solyc05g050440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 17.87 | 45.03 |
TraesCS3B01G499000.1 | Wheat | plasma membrane | 42.69 | 44.99 |
Solyc06g061260.1.1 | Tomato | plasma membrane | 19.72 | 44.04 |
KRG89633 | Soybean | plasma membrane | 40.84 | 43.24 |
PGSC0003DMT400082135 | Potato | plasma membrane | 9.74 | 41.18 |
Zm00001d044387_P001 | Maize | nucleus | 76.57 | 38.55 |
TraesCS6B01G381900.1 | Wheat | plasma membrane | 36.19 | 30.53 |
TraesCS6B01G382000.2 | Wheat | cytosol, peroxisome, plasma membrane | 37.12 | 29.74 |
TraesCS2B01G065200.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.59 | 29.08 |
TraesCS6B01G007400.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.59 | 28.77 |
TraesCS4B01G074300.1 | Wheat | plasma membrane | 31.09 | 28.33 |
TraesCS5B01G084900.1 | Wheat | plasma membrane | 36.89 | 26.54 |
TraesCS5B01G485500.1 | Wheat | plasma membrane | 25.06 | 25.41 |
TraesCS5B01G485400.1 | Wheat | plasma membrane | 24.59 | 25.18 |
TraesCS5B01G173000.1 | Wheat | plasma membrane | 23.67 | 24.23 |
TraesCS2B01G297200.1 | Wheat | plasma membrane | 22.74 | 23.33 |
TraesCS6B01G271500.1 | Wheat | plasma membrane | 22.51 | 23.04 |
TraesCS2B01G421800.1 | Wheat | plasma membrane | 22.27 | 22.7 |
Protein Annotations
EnsemblPlants:TraesCS4B01G285800.1 | EnsemblPlantsGene:TraesCS4B01G285800 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF297 | PFAM:PF01490 |
SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.7 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:569405248..569406543
Molecular Weight (calculated)
45506.0 Da
IEP (calculated)
8.758
GRAVY (calculated)
0.733
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEHKTNGLG ATASPLGEPL LTATGKRADR DAEAQLPPYR SAGASFSRTC LNLTNAVSGI GVLSMPYAVS RGGWLSLALF ALVGAVCYYT GTLIGRCMRA
101: DGSVATYPDV GQLAFGAAGR RTVALFMYVE LYLVAISFLV LEGDNLDKLF PGAGVELPAG YWLRGKQLFI VLAGAVVLPT TWLKNLGVLA YVSALGLVAS
201: AALTASLIWA GVSESGFRGS GNVLNLAGLP TSLGLYFVCF TGHAVFPTIY SSMRNRERFS QVLLFSSVLC SINYGFTAVL GYLIYGDDVQ SQVTLNLPSG
301: RLYTKIAIVM TLINPLTKYA LLVAPITSAI EERFSLAGSG SARVAISTAV LVSTVAVASM VPFFGFLMSF IGSFLSVMAT VFFPCLCYLN IYKAKGLSRV
401: EVAAIVAILL LGAFVAITGT YTSLLDIIGT F
101: DGSVATYPDV GQLAFGAAGR RTVALFMYVE LYLVAISFLV LEGDNLDKLF PGAGVELPAG YWLRGKQLFI VLAGAVVLPT TWLKNLGVLA YVSALGLVAS
201: AALTASLIWA GVSESGFRGS GNVLNLAGLP TSLGLYFVCF TGHAVFPTIY SSMRNRERFS QVLLFSSVLC SINYGFTAVL GYLIYGDDVQ SQVTLNLPSG
301: RLYTKIAIVM TLINPLTKYA LLVAPITSAI EERFSLAGSG SARVAISTAV LVSTVAVASM VPFFGFLMSF IGSFLSVMAT VFFPCLCYLN IYKAKGLSRV
401: EVAAIVAILL LGAFVAITGT YTSLLDIIGT F
001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
Arabidopsis Description
AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.