Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G282000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 96.07 | 96.07 |
| TraesCS2D01G280800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 94.59 | 94.59 |
| HORVU2Hr1G069080.4 | Barley | cytosol, peroxisome, plasma membrane | 91.65 | 91.65 |
| TraesCS3B01G499000.1 | Wheat | plasma membrane | 78.62 | 78.24 |
| TraesCS7B01G093100.1 | Wheat | plasma membrane | 63.39 | 64.66 |
| Solyc06g061270.1.1 | Tomato | cytosol, plasma membrane | 28.26 | 54.76 |
| Solyc05g050440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 22.36 | 53.22 |
| GSMUA_Achr7P18140_001 | Banana | plasma membrane | 55.04 | 52.71 |
| VIT_01s0026g02500.t01 | Wine grape | plasma membrane | 52.83 | 52.31 |
| Solyc05g053970.2.1 | Tomato | plasma membrane | 45.21 | 52.27 |
| TraesCS2B01G342900.1 | Wheat | plasma membrane | 51.35 | 49.18 |
| KRG89633 | Soybean | plasma membrane | 48.4 | 48.4 |
| TraesCS1B01G058900.1 | Wheat | plasma membrane | 50.61 | 48.13 |
| PGSC0003DMT400019843 | Potato | peroxisome, plasma membrane, plastid, vacuole | 17.44 | 47.33 |
| TraesCS2B01G343300.2 | Wheat | plasma membrane | 50.86 | 47.05 |
| TraesCS2B01G343200.2 | Wheat | plasma membrane | 51.11 | 46.02 |
| Solyc06g061260.1.1 | Tomato | plasma membrane | 21.62 | 45.6 |
| TraesCS4B01G285500.1 | Wheat | plasma membrane | 45.21 | 42.69 |
| TraesCS4B01G285800.1 | Wheat | peroxisome, plasma membrane, vacuole | 45.21 | 42.69 |
| PGSC0003DMT400082135 | Potato | plasma membrane | 10.32 | 41.18 |
| TraesCS6B01G381900.1 | Wheat | plasma membrane | 41.52 | 33.07 |
| TraesCS6B01G382000.2 | Wheat | cytosol, peroxisome, plasma membrane | 43.0 | 32.53 |
| TraesCS6B01G007400.1 | Wheat | cytosol, peroxisome, plasma membrane | 40.54 | 29.31 |
| TraesCS2B01G065200.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.57 | 28.19 |
| TraesCS4B01G074300.1 | Wheat | plasma membrane | 31.7 | 27.27 |
| TraesCS5B01G084900.1 | Wheat | plasma membrane | 39.07 | 26.54 |
| TraesCS5B01G485500.1 | Wheat | plasma membrane | 23.59 | 22.59 |
| TraesCS6B01G271500.1 | Wheat | plasma membrane | 23.34 | 22.57 |
| TraesCS5B01G485400.1 | Wheat | plasma membrane | 22.85 | 22.09 |
| TraesCS5B01G173000.1 | Wheat | plasma membrane | 22.6 | 21.85 |
| TraesCS2B01G297200.1 | Wheat | plasma membrane | 21.87 | 21.19 |
| TraesCS2B01G421800.1 | Wheat | plasma membrane | 21.87 | 21.04 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G299200.1 | EnsemblPlantsGene:TraesCS2B01G299200 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF280 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.7 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:419502504..419504053
Molecular Weight (calculated)
42891.3 Da
IEP (calculated)
9.413
GRAVY (calculated)
0.777
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTSTANTDP PPSSGKTSFL KTCFNGINAL SGVGLLSIPY ALSQGGWLSL IVFMATAITC FYTGLLLQRC MDSSSLVNTY PDIGAHAFGR RGRLIVATFM
101: YLELYLVAID FLILEGDNLH KLFPAASFRL GALHVSGKHA FVLAATLAVL PTTWFSSLNV LAYVAAGGAL ASVLLIAAVL WVGVFDGVGF RERGRLVRWD
201: SMPSAMSLYS FCFSGHAVFP MIYTGMKDRK RFPMVLSLCF TVSTLSYGLM GIVGYLMYGD TLKSQITLNL PSASVAAKVA IYTTLVNPLS KYALVVAPVA
301: EAAEGALGVG KSAPFRALVR TVLVFGTAVV ALAVPFFADV VGLTGALLSC TATMLLPCLC YLKVRSKIGG ARGMGLETAA CLAVVAIGTA IVGLGTYSSV
401: KQIVGKL
101: YLELYLVAID FLILEGDNLH KLFPAASFRL GALHVSGKHA FVLAATLAVL PTTWFSSLNV LAYVAAGGAL ASVLLIAAVL WVGVFDGVGF RERGRLVRWD
201: SMPSAMSLYS FCFSGHAVFP MIYTGMKDRK RFPMVLSLCF TVSTLSYGLM GIVGYLMYGD TLKSQITLNL PSASVAAKVA IYTTLVNPLS KYALVVAPVA
301: EAAEGALGVG KSAPFRALVR TVLVFGTAVV ALAVPFFADV VGLTGALLSC TATMLLPCLC YLKVRSKIGG ARGMGLETAA CLAVVAIGTA IVGLGTYSSV
401: KQIVGKL
001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
Arabidopsis Description
AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.