Factsheet for TraesCS2A01G282000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, vacuole, plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid, vacuole
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid, vacuole
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G280800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	97.05	97.05
TraesCS2B01G299200.1	Wheat	plasma membrane	96.07	96.07
HORVU2Hr1G069080.4	Barley	cytosol, peroxisome, plasma membrane	92.38	92.38
TraesCS7A01G188100.1	Wheat	plasma membrane	64.37	65.66
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	27.76	53.81
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	22.36	53.22
GSMUA_Achr7P18140_001	Banana	plasma membrane	55.53	53.18
Solyc05g053970.2.1	Tomato	plasma membrane	45.7	52.84
VIT_01s0026g02500.t01	Wine grape	plasma membrane	52.83	52.31
TraesCS2A01G339100.1	Wheat	plasma membrane	51.35	49.18
KRG89633	Soybean	plasma membrane	48.4	48.4
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	17.69	48.0
TraesCS2A01G338800.1	Wheat	plasma membrane	52.09	47.43
TraesCS2A01G338600.1	Wheat	plasma membrane	50.86	47.05
Solyc06g061260.1.1	Tomato	plasma membrane	22.11	46.63
TraesCS4A01G018500.1	Wheat	peroxisome, plasma membrane, vacuole	46.44	43.85
TraesCS4A01G018400.1	Wheat	peroxisome, plasma membrane, vacuole	46.44	43.85
PGSC0003DMT400082135	Potato	plasma membrane	10.32	41.18
TraesCS4A01G018300.1	Wheat	peroxisome, plasma membrane, vacuole	41.03	41.13
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	40.05	34.17
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	41.77	32.14
TraesCS6A01G002400.1	Wheat	cytosol, nucleus, plasma membrane	40.54	29.15
TraesCS2A01G052500.1	Wheat	plasma membrane	39.07	28.7
TraesCS4A01G240700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	31.45	28.32
TraesCS5A01G081500.1	Wheat	plasma membrane	40.05	27.3
TraesCS6A01G254100.1	Wheat	plasma membrane	23.1	22.33
TraesCS5A01G472600.1	Wheat	plasma membrane	22.85	21.88
TraesCS5A01G472500.1	Wheat	plasma membrane	22.6	21.85
TraesCS2A01G403800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	22.36	21.51
TraesCS5A01G176900.1	Wheat	plasma membrane	22.11	21.38
TraesCS2A01G279700.1	Wheat	plasma membrane	21.38	20.71
TraesCS2A01G279600.1	Wheat	plasma membrane	0.25	0.28

Protein Annotations

EnsemblPlants:TraesCS2A01G282000.1	EnsemblPlantsGene:TraesCS2A01G282000	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr2A:-:471012699..471014321

Molecular Weight (calculated)

42998.7 Da

IEP (calculated)

9.526

GRAVY (calculated)

0.811

Length

407 amino acids

Sequence
(BLAST)

001: MDMSTANTDP PPSSGKTSFL KTCINGINAL SGVGLLSIPY ALSQGGWLSL IVFMAIAVIC FYTGLLLQRC MDSSSLVNTY PDIGAHAFGR RGRVIVATFM
101: YLELYLVAID FLILEGDNLH KLFPAASFRL GALRVSGKQA FVLAATLAVL PTTWFSSLNV LAYVAAGGAL ASVLLIAAVL WVGVFDGVGF RERGRLVRWD
201: SMPSAMSLYS FCFSGHAVFP MIYTGMKDRK RFPMVLSLCF IVSTLSYGLM GIVGYLMYGD TLKSQITLNV PSASVAAKVA IYTTLVNPLA KYALVVAPVA
301: EAAEGALGVG KSAPFRALVR TVLVVGTAVV ALAVPFFADV VGLTGALLSC TATMLLPCLC YLKVRSKIGG DRGMGLETAA CLAIVAIGTA IVGLGTYSSV
401: KQIIRKL

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.