Factsheet for TraesCS7B01G093100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G189100.1	Wheat	plasma membrane	98.5	98.5
TraesCS7A01G188100.1	Wheat	plasma membrane	98.25	98.25
HORVU7Hr1G038300.27	Barley	plasma membrane	98.25	98.0
KXG19641	Sorghum	plasma membrane	79.95	79.95
Zm00001d037229_P001	Maize	plasma membrane	79.45	79.45
Os06t0228500-01	Rice	plasma membrane	77.94	75.3
TraesCS2B01G299200.1	Wheat	plasma membrane	64.66	63.39
TraesCS3B01G499000.1	Wheat	plasma membrane	62.41	60.88
GSMUA_Achr7P18140_001	Banana	plasma membrane	64.66	60.71
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	29.57	56.19
VIT_01s0026g02500.t01	Wine grape	plasma membrane	57.64	55.96
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	23.31	54.39
Solyc05g053970.2.1	Tomato	plasma membrane	47.87	54.26
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	20.3	54.0
TraesCS2B01G342900.1	Wheat	plasma membrane	52.88	49.65
KRG89633	Soybean	plasma membrane	50.38	49.39
TraesCS1B01G058900.1	Wheat	plasma membrane	52.88	49.3
Solyc06g061260.1.1	Tomato	plasma membrane	23.81	49.22
TraesCS2B01G343300.2	Wheat	plasma membrane	52.88	47.95
PGSC0003DMT400082135	Potato	plasma membrane	11.53	45.1
TraesCS2B01G343200.2	Wheat	plasma membrane	50.63	44.69
TraesCS4B01G285800.1	Wheat	peroxisome, plasma membrane, vacuole	47.87	44.32
TraesCS4B01G285500.1	Wheat	plasma membrane	46.87	43.39
TraesCS6B01G381900.1	Wheat	plasma membrane	42.61	33.27
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	43.11	31.97
TraesCS6B01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	43.36	30.73
TraesCS2B01G065200.1	Wheat	cytosol, peroxisome, plasma membrane	42.11	30.16
TraesCS4B01G074300.1	Wheat	plasma membrane	35.09	29.6
TraesCS5B01G084900.1	Wheat	plasma membrane	42.36	28.21
TraesCS5B01G173000.1	Wheat	plasma membrane	24.56	23.28
TraesCS2B01G297200.1	Wheat	plasma membrane	23.06	21.9
TraesCS5B01G485400.1	Wheat	plasma membrane	23.06	21.85
TraesCS5B01G485500.1	Wheat	plasma membrane	23.06	21.65
TraesCS6B01G271500.1	Wheat	plasma membrane	22.31	21.14
TraesCS2B01G421800.1	Wheat	plasma membrane	21.8	20.57

Protein Annotations

EnsemblPlants:TraesCS7B01G093100.1	EnsemblPlantsGene:TraesCS7B01G093100	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr7B:+:106774401..106776299

Molecular Weight (calculated)

42941.7 Da

IEP (calculated)

8.916

GRAVY (calculated)

0.876

Length

399 amino acids

Sequence
(BLAST)

001: MDTSTPSKSG TSFLKTCFNG VNALSGVGIL SIPYALSQGG WLSVLMFTTI AVICFYTGIL IQRCIDSSSL VKTYPDIGEL AFGRKGRIIV AIFMYLELYL
101: VAIDFMILEG DNLEKLFPSV DFHVAGLKIG GKQGFVLIFS LLVLPTTWFR SLSALAYVSV GGIMASVILI AAVIWVGAFD GVGFHERGVL VHWAGIPTAM
201: SLYSFCFSGH AVFPMIYTGM SNRKMFPTVL LLCFIICTLS YGLMGVVGYL MYGESLKSQV TLNLPSRNLS SSIAIYTTLI NPFTKFALLV TPIAEAIEDT
301: LHVGKNKAVS VSIRTSLVVS TTIVALVVPY FAYAVALTGS FLSGTATMLL PCICYLKIRS RTCRKVGFEQ VVCVGIIVVG VGLVVVGTSS SLKQIIQSL

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.