Factsheet for GSMUA_Achr5P10650_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	81.95	80.64
Bra007103.1-P	Field mustard	plasma membrane	48.38	68.02
Solyc03g063030.2.1	Tomato	plasma membrane	28.7	67.66
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	66.25	65.19
CDY18351	Canola	plastid	59.75	65.03
Bra005061.1-P	Field mustard	cytosol, nucleus, plasma membrane	52.35	62.91
CDY44630	Canola	plasma membrane	62.09	62.66
AT2G39130.2	Thale cress	cytosol, nucleus, plasma membrane	61.73	62.18
CDX74865	Canola	plasma membrane	61.91	62.14
CDX93284	Canola	cytosol, nucleus, plasma membrane	60.83	61.72
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	60.83	61.72
CDX78269	Canola	plasma membrane	59.03	61.7
CDX73443	Canola	cytosol, nucleus, plasma membrane	59.57	61.45
PGSC0003DMT400036273	Potato	cytosol, nucleus, plasma membrane	48.19	60.14
Solyc11g008440.1.1	Tomato	cytosol, nucleus, plasma membrane	60.11	60.0
Os04t0201800-00	Rice	plasma membrane, plastid	42.42	58.46
Os02t0101000-01	Rice	cytosol, nucleus, plasma membrane	60.11	58.32
TraesCS6B01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	59.03	58.08
Zm00001d004340_P002	Maize	plasma membrane	59.39	57.72
TraesCS6A01G002400.1	Wheat	cytosol, nucleus, plasma membrane	58.84	57.6
TraesCS2A01G052500.1	Wheat	plasma membrane	57.58	57.58
TraesCSU01G023100.1	Wheat	cytosol, peroxisome, plasma membrane	57.76	57.45
TraesCS2B01G065200.1	Wheat	cytosol, peroxisome, plasma membrane	57.76	57.45
EES06091	Sorghum	plasma membrane	59.57	57.29
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	58.12	56.79
TraesCS6D01G003200.1	Wheat	cytosol, nucleus, plasma membrane	58.3	56.67
HORVU2Hr1G008090.4	Barley	cytosol, peroxisome, plasma membrane	57.4	56.58
HORVU6Hr1G001480.1	Barley	plasma membrane	59.03	55.05
EER89806	Sorghum	cytosol, nucleus, plasma membrane	56.68	54.99
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	15.16	54.9
Zm00001d043640_P001	Maize	plasma membrane	16.61	54.44
AT3G54830.1	Thale cress	nucleus	53.61	54.4
PGSC0003DMT400019190	Potato	cytosol, nucleus, plasma membrane	58.12	53.49
Solyc03g063040.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	11.55	52.03
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	48.56	51.14
KXG25873	Sorghum	plasma membrane	59.39	50.0
GSMUA_Achr6P34060_001	Banana	plasma membrane	47.11	47.28
Solyc03g063050.1.1	Tomato	extracellular, plasma membrane	22.38	46.62
GSMUA_Achr7P18140_001	Banana	plasma membrane	32.85	42.82
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	41.52	42.59
GSMUA_Achr10P...	Banana	plasma membrane	31.95	40.23
KRG99991	Soybean	cytosol, nucleus, peroxisome	19.13	37.19
GSMUA_Achr6P35440_001	Banana	plasma membrane	29.06	37.01
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	26.9	31.5
GSMUA_Achr1P02810_001	Banana	cytosol, plasma membrane, vacuole	16.79	23.6
GSMUA_Achr4P25490_001	Banana	plasma membrane	16.61	23.47
GSMUA_Achr5P11060_001	Banana	plasma membrane	15.34	21.46
GSMUA_AchrUn_...	Banana	plasma membrane, plastid, vacuole	15.88	21.05
GSMUA_Achr1P27880_001	Banana	nucleus, peroxisome, plasma membrane	12.64	20.06

Protein Annotations

EnsemblPlants:GSMUA_Achr5P10650_001	EnsemblPlants:GSMUA_Achr5T10650_001	EnsemblPlantsGene:GSMUA_Achr5G10650_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF240	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI000296B664	UniProt:M0SXE4	MapMan:24.2.3.4.7	:	:	:

Description

transmembrane amino acid transporter protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G10650_001]

Coordinates

chr5:-:7621816..7630612

Molecular Weight (calculated)

60040.4 Da

IEP (calculated)

5.380

GRAVY (calculated)

0.284

Length

554 amino acids

Sequence
(BLAST)

001: MKNSLSDHNL FIDSEEDDDA NEEDEEEEGS KACPSEVAGG DADGSDSPSD DDCLPRSRPS SHSTNWPQSY RQSIDMYSGL SPATGFLGTP TLSRLSSSFF
101: SSFRVKHTPE KTASLIKPLL PTTTADEQPQ EERQSSDSLL TPLLPSRKPS LEKIQEKVFH ELPSSRNSSY GQAVFNGMNV LCGVGILSTP YAVKEGGWLG
201: LSILLTYAVL AWYTGILLRH CLDSQQGLAT YPDIGQAAFG TTGRIAISII LYLELYASCV EYIILERDNL SSLFPNAQLN IGGTHIDSHL LFATLTTVIV
301: LPTTWLRDLS VLSYISVGGV IASVLVVLSL FWVGQFDHVG FQNKGTPLNL SGIPIAIGIY GFCYSGHAVF PNIYSSLKKP NQFPSVLFVS FVICTVMYAA
401: VAVMGYTMNG ESTLSQFTLN MPQNLLASKV AVWTTVVNPI TKYPLNCYFI HELLPANSSN SHLYAIMIRT TLVLSTLIVA LSIPFFGLVM ALIGSLLTML
501: VTLILPCACF LSILRGRVTR TQGLLCTFII AIGAVSSIIG TTTSLSKIIG QLSS

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.