Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005061.1-P Field mustard cytosol, nucleus, plasma membrane 82.79 99.13
CDY44630 Canola plasma membrane 97.83 98.36
AT2G39130.2 Thale cress cytosol, nucleus, plasma membrane 89.86 90.18
CDX93284 Canola cytosol, nucleus, plasma membrane 89.13 90.11
CDY18351 Canola plastid 81.7 88.61
CDX78269 Canola plasma membrane 73.37 76.42
CDX73443 Canola cytosol, nucleus, plasma membrane 71.92 73.93
Solyc03g063030.2.1 Tomato plasma membrane 30.8 72.34
VIT_13s0019g04660.t01 Wine grape cytosol, nucleus, plasma membrane 72.1 70.69
KRG91942 Soybean plasma membrane 69.38 70.4
KRH34828 Soybean plasma membrane 68.48 67.38
Solyc11g008440.1.1 Tomato cytosol, nucleus, plasma membrane 67.39 67.03
KRG99573 Soybean cytosol, nucleus, plasma membrane 12.86 66.36
Solyc03g063040.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 14.67 65.85
PGSC0003DMT400036273 Potato cytosol, nucleus, plasma membrane 52.54 65.32
GSMUA_Achr1P03170_001 Banana cytosol, nucleus, plasma membrane 64.49 63.23
GSMUA_Achr5P10650_001 Banana cytosol, nucleus, plasma membrane 62.14 61.91
PGSC0003DMT400019190 Potato cytosol, nucleus, plasma membrane 65.4 59.97
Zm00001d044994_P001 Maize cytosol, plasma membrane, vacuole 16.12 58.17
TraesCS2A01G052500.1 Wheat plasma membrane 56.7 56.5
TraesCSU01G023100.1 Wheat cytosol, peroxisome, plasma membrane 56.88 56.37
Zm00001d004340_P002 Maize plasma membrane 58.15 56.32
TraesCS2B01G065200.1 Wheat cytosol, peroxisome, plasma membrane 56.7 56.19
HORVU2Hr1G008090.4 Barley cytosol, peroxisome, plasma membrane 56.88 55.87
Os04t0201800-00 Rice plasma membrane, plastid 40.22 55.22
Os02t0101000-01 Rice cytosol, nucleus, plasma membrane 57.07 55.17
Zm00001d048577_P001 Maize cytosol, nucleus, plasma membrane 55.62 54.14
EES06091 Sorghum plasma membrane 56.16 53.82
TraesCS6B01G007400.1 Wheat cytosol, peroxisome, plasma membrane 54.53 53.46
TraesCS6A01G002400.1 Wheat cytosol, nucleus, plasma membrane 54.53 53.18
TraesCS6D01G003200.1 Wheat cytosol, nucleus, plasma membrane 54.71 52.98
Zm00001d043640_P001 Maize plasma membrane 15.94 52.07
EER89806 Sorghum cytosol, nucleus, plasma membrane 53.8 52.01
HORVU6Hr1G001480.1 Barley plasma membrane 54.35 50.51
Solyc03g063050.1.1 Tomato extracellular, plasma membrane 24.28 50.38
KRH38592 Soybean endoplasmic reticulum 21.56 49.79
CDX73974 Canola cytosol, nucleus, plasma membrane 36.41 49.14
KXG25873 Sorghum plasma membrane 57.61 48.33
CDY07919 Canola cytosol, nucleus, plasma membrane 46.01 48.11
Zm00001d037057_P001 Maize cytosol, nucleus, plasma membrane 45.65 47.91
CDY55126 Canola plasma membrane 44.57 47.86
CDY40336 Canola plasma membrane 46.92 47.35
CDY10463 Canola plasma membrane 46.38 46.89
CDX73972 Canola extracellular, plastid 10.33 43.51
CDY35425 Canola plasma membrane 40.94 43.46
CDY22507 Canola plasma membrane 40.76 43.27
CDX80808 Canola plasma membrane 19.75 43.08
CDY55127 Canola cytosol, plasma membrane, plastid 45.11 42.64
CDY23868 Canola cytosol, nucleus, plasma membrane 40.58 42.34
CDX79951 Canola cytosol, nucleus, plasma membrane 40.4 42.16
CDY06942 Canola cytosol, peroxisome, plasma membrane 40.76 42.13
CDY67831 Canola cytosol, peroxisome, plasma membrane 40.4 41.84
CDX80809 Canola plasma membrane 44.93 41.82
CDX91000 Canola plasma membrane 29.35 37.67
CDX85556 Canola plasma membrane 29.17 37.53
CDX86397 Canola plasma membrane 26.09 35.56
CDX85233 Canola plasma membrane 26.09 35.56
CDY44419 Canola plasma membrane 26.09 35.56
CDY38090 Canola plasma membrane 22.83 29.1
CDY21456 Canola plasma membrane 18.3 25.06
CDY04048 Canola plasma membrane 26.27 25.0
CDY70145 Canola plasma membrane 18.12 24.81
CDY59097 Canola plastid 19.57 24.38
CDY01068 Canola plasma membrane 18.3 24.11
CDY54797 Canola plastid 19.38 24.04
CDY08487 Canola plasma membrane 18.12 23.98
CDY47026 Canola peroxisome, plastid 18.66 23.9
CDY42861 Canola peroxisome 18.48 23.83
CDY53922 Canola plasma membrane 18.12 23.47
CDX73848 Canola plasma membrane 18.12 23.47
CDX85489 Canola vacuole 17.75 22.69
Protein Annotations
EnsemblPlants:CDX74865EnsemblPlantsGene:GSBRNA2T00116855001GO:A0A078CDB6InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF240
PFAM:PF01490ProteinID:CDX74865ProteinID:CDX74865.1SEG:segTMHMM:TMhelixUniParc:UPI0004EE01C0
MapMan:24.2.3.4.7:::::
Description
BnaA05g06110D
Coordinates
chrLK031802:+:1109371..1113672
Molecular Weight (calculated)
60254.8 Da
IEP (calculated)
5.015
GRAVY (calculated)
0.304
Length
552 amino acids
Sequence
(BLAST)
001: MNHVPSDQSF YIESEEEDDR KDYEEEDDDD QSHSNSSDAN DDNQTQTKPS SYTTAWPQSY RQSIDLYSSV PSPNIGFLGN NSVTRFGSSF LSSSLIRRHT
101: PESLPAVTKP LLEADEQALP PPPKHRLSSH GLLSPAPSRR GSMRKDEKVS MVSHEIPMSR NSSYGQAVLN GLNVLCGVGI LSTPYAAKEG GWLGLMILFI
201: YGLLSFYTGI LLRYCLDSES DLETYPDIGQ AAFGTTGRIF VSIVLYLELY ACCVEYIILE SDNLSSLFPN AAFGFGGFEL DARHLFAILT TLAVLPTVWL
301: RDLSVLSYIS AGGVIASVLV VLCLFWIGLV DEVGIHSKGT TLNLSTLPVA IGLYGYCYSG HAVFPNIYTS MAKPTQYPAV LLTCFGICTL MYAGVAVMGY
401: TMFGEATESQ FTLNLPQELV ATKIAVWTTV NRTNITYALT ISPVALSLEE LIPERHNKSH WYAIAIRTAL VFSTLLVGLS IPFFGLVMSL IGSLLTMLVT
501: LILPPVCFLS IVRGKVTSTQ MMLCVLIIII GAISSVIGSY SALSKIIQKL SS
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.