Factsheet for Bra005712.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55127	Canola	cytosol, plasma membrane, plastid	98.8	84.93
Bra001315.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.52	66.1
Bra009608.1-P	Field mustard	plasma membrane	66.14	60.69
HORVU2Hr1G075350.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	19.32	56.4
Bra007103.1-P	Field mustard	plasma membrane	42.03	53.55
HORVU4Hr1G022660.1	Barley	extracellular	22.91	52.04
Solyc10g084830.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.6	47.07
PGSC0003DMT400028760	Potato	cytosol, peroxisome, plasma membrane	49.0	46.5
Bra005061.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.43	45.12
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.41	43.59
GSMUA_Achr6P34060_001	Banana	plasma membrane	46.61	42.39
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	44.62	38.89
Bra000217.1-P	Field mustard	plasma membrane	39.44	38.08
HORVU5Hr1G020560.3	Barley	plasma membrane	43.82	37.16
TraesCS5B01G084900.1	Wheat	plasma membrane	44.02	36.89
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	38.84	36.86
TraesCS5D01G091100.1	Wheat	plasma membrane	43.63	36.74
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.04	36.7
TraesCS5A01G081500.1	Wheat	plasma membrane	43.43	36.52
Os12t0574000-01	Rice	plasma membrane	43.03	36.36
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	19.52	36.3
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	12.75	35.56
Zm00001d041534_P002	Maize	plasma membrane	43.03	35.47
Zm00001d030751_P001	Maize	plasma membrane	44.62	35.44
Bra033075.1-P	Field mustard	plasma membrane	26.89	33.33
Bra025369.1-P	Field mustard	plasma membrane	26.29	32.59
Bra023581.1-P	Field mustard	plasma membrane	19.32	30.79
Bra000591.1-P	Field mustard	plasma membrane	19.32	24.01
Bra001425.1-P	Field mustard	plasma membrane	19.92	23.47
Bra029326.1-P	Field mustard	peroxisome	19.92	23.36
Bra034803.1-P	Field mustard	plasma membrane	18.92	22.25
Bra033558.1-P	Field mustard	plasma membrane	15.14	21.23

Protein Annotations

EnsemblPlants:Bra005712.1	EnsemblPlants:Bra005712.1-P	EnsemblPlantsGene:Bra005712	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF313	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI000253FA9F	UniProt:M4CNC4	MapMan:24.2.3.4.7	:	:	:

Description

AT5G02170 (E=6e-192) | amino acid transporter family protein

Coordinates

chrA03:+:234452..237012

Molecular Weight (calculated)

54645.0 Da

IEP (calculated)

5.421

GRAVY (calculated)

0.481

Length

502 amino acids

Sequence
(BLAST)

001: MKQEEQERED LYHTDDDEDE ESQAYSSVPS TPLSRNDSNN DAVPWPRSYR QSMDLLTGVT PPISTNLVSS FRKRRQSSAF GSFASSSSKQ SLLIDKDETQ
101: NSIVTAIKSF IDSHLKLSVP DDLSIPQENR KCTISQSVIN GVNVLCGGAL LTMPYALKEG GWLGLLILFS FGVITLYTGI LLKRCLENSP GIHTYPDIGQ
201: AAFGTTGRIL LSIFLYMDLY ATCVEYIIMM SDNMSGMFPN TSLYIAGISL NSNQVFAVTT TLIVLPTVWL RDLSLLSYIS AGGVFSSILL ALCLFWVGSV
301: GGVGFQLQGQ VLDLTNLPVA IGIYGFGFGG HAVLPNIYSS MKEPSKFPLV LLMSFGFCTL FYIAISVCGY TMFGEAIQSQ FTLNMPQYFT SSKIAVWTAV
401: ITPMTKYPLT LTPVLLSLEE LLPSSSRKMR SKGVSMIIRT ILVLSTLVVA LTVPFFATVA ALIGSFVAML IMAICVLIII VGVVSGVCGT YSAIVRLIAE
501: MT

Best Arabidopsis Sequence Match ( AT5G02170.1 )
(BLAST)

001: MKQNETFDQE REDLYHTFDE EDEESQTESS VPSTPLSRNR SEDVPVPWPR SYRQSMDLLT GVTPPTSTSF VSSFRQRRQS SVFGSFTSSP SKQQLLIDKD
101: EIQSSVVSSI KSFLASHLQL SVPGDLLTPQ ENRSCTFSQS VLNGINVLCG VALLTMPYAV KEGGWLGLFI LFSFGIITFY TGILLKRCLE NSPGIHTYPD
201: IGQAAFGTTG RILVSILLYV ELYASCVEYI IMMSDNLSRM FPNTSLYING FSLDSTQVFA ITTTLIVLPT VWLKDLSLLS YLSAGGVISS ILLALCLFWA
301: GSVDGVGFHI SGQALDITNI PVAIGIYGFG FGSHSVFPNI YSSMKEPSKF PTVLLISFAF CTLFYIAVAV CGFTMFGDAI QSQFTLNMPP HFTSSKIAVW
401: TAVVTPMTKY ALTITPVMLS LEELIPSSSR KMRSKGVSML FRTILVLSTL VVALTVPFFA TVAALIGSFI AMLIALIFPC LCYISIMKGR LTNFQIGICI
501: LIVIIGIVSG CCGTYSAIAR LIGEMT

Arabidopsis Description

AVT1EAmino acid transporter AVT1E [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.