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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • mitochondrion 1
  • extracellular 4
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G075350.2 Barley endoplasmic reticulum, plasma membrane, vacuole 71.49 91.86
HORVU5Hr1G020560.3 Barley plasma membrane 92.31 34.46
CDX80808 Canola plasma membrane 38.91 33.99
TraesCS5A01G081500.1 Wheat plasma membrane 90.05 33.33
TraesCS5D01G091100.1 Wheat plasma membrane 89.59 33.22
TraesCS5B01G084900.1 Wheat plasma membrane 89.59 33.06
EES17245 Sorghum cytosol, peroxisome, plasma membrane 80.09 30.73
Os12t0574000-01 Rice plasma membrane 79.64 29.63
Zm00001d030751_P001 Maize plasma membrane 80.09 28.01
Zm00001d041534_P002 Maize plasma membrane 74.66 27.09
GSMUA_Achr6P34060_001 Banana plasma membrane 61.54 24.64
HORVU7Hr1G038300.27 Barley plasma membrane 44.34 24.5
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 55.66 23.3
CDY07919 Canola cytosol, nucleus, plasma membrane 55.2 23.11
AT5G02170.1 Thale cress plasma membrane 54.75 23.0
Bra005712.1-P Field mustard plasma membrane 52.04 22.91
AT3G09340.1 Thale cress plasma membrane 53.39 22.35
AT3G09330.1 Thale cress cytosol, nucleus, plasma membrane 52.94 22.33
Solyc10g084830.1.1 Tomato cytosol, peroxisome, plasma membrane 53.39 22.31
PGSC0003DMT400028760 Potato cytosol, peroxisome, plasma membrane 52.94 22.12
CDY55126 Canola plasma membrane 50.68 21.79
HORVU2Hr1G068460.1 Barley endoplasmic reticulum, plasma membrane, vacuole 15.38 21.66
HORVU2Hr1G080420.1 Barley plasma membrane 41.63 21.65
HORVU2Hr1G080390.1 Barley plasma membrane 41.63 21.65
HORVU2Hr1G080430.3 Barley cytosol 42.99 21.59
HORVU2Hr1G080350.5 Barley mitochondrion, plasma membrane, vacuole 42.53 21.32
HORVU2Hr1G069080.4 Barley cytosol, peroxisome, plasma membrane 38.91 21.13
CDY10463 Canola plasma membrane 51.58 20.88
CDY40336 Canola plasma membrane 51.58 20.84
Bra009608.1-P Field mustard plasma membrane 51.13 20.66
HORVU2Hr1G008090.4 Barley cytosol, peroxisome, plasma membrane 52.49 20.64
AT5G02180.1 Thale cress plasma membrane 51.13 20.55
CDY55127 Canola cytosol, plasma membrane, plastid 52.94 20.03
HORVU6Hr1G001480.1 Barley plasma membrane 53.85 20.03
CDX80809 Canola plasma membrane 51.13 19.06
HORVU4Hr1G012350.1 Barley endoplasmic reticulum, plasma membrane 33.94 18.75
Zm00001d032325_P001 Maize mitochondrion, plasma membrane, vacuole 22.17 18.15
HORVU6Hr1G083720.2 Barley plastid 47.06 17.87
HORVU5Hr1G053550.1 Barley plasma membrane 25.79 13.54
HORVU5Hr1G112210.1 Barley plasma membrane 24.43 12.71
HORVU5Hr1G112960.2 Barley cytosol 19.91 12.57
HORVU2Hr1G068450.4 Barley mitochondrion 22.17 11.58
HORVU6Hr1G064740.1 Barley plasma membrane 21.27 11.16
Protein Annotations
EnsemblPlants:HORVU4Hr1G022660.1EnsemblPlantsGene:HORVU4Hr1G022660GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF249PFAM:PF01490TMHMM:TMhelixUniParc:UPI000B478FD0UniProt:A0A287NIV9
MapMan:24.2.3.4.7:::::
Description
No Description!
Coordinates
chrchr4H:-:120025317..120026635
Molecular Weight (calculated)
24131.4 Da
IEP (calculated)
8.346
GRAVY (calculated)
1.014
Length
221 amino acids
Sequence
(BLAST)
001: MALAILPSVW LRNLSLLSYL SAGGVVATLT VIVCLFWVGI GDGVGFHPSG SALNLTHLPV ALGLYGYCFS GHLVFANIYS SMKERLQFPF VLLFCFIVVT
101: IVYSGVAATG FLMFGESTMS QFTLSMPQQY VPSKIAIWMM IVNPYTKYAL TMTLVALSIE EALPKKMQNY VAGMCVRTVL VLSTIVVALS FPYFALVMAL
201: LGSVFTMLSG YIMYNICHSS C
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.