Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009608.1-P | Field mustard | plasma membrane | 86.91 | 87.39 |
| CDY40336 | Canola | plasma membrane | 86.91 | 87.39 |
| CDY10463 | Canola | plasma membrane | 86.0 | 86.63 |
| AT5G02170.1 | Thale cress | plasma membrane | 64.55 | 67.49 |
| AT3G09330.1 | Thale cress | cytosol, nucleus, plasma membrane | 62.91 | 66.03 |
| AT3G09340.1 | Thale cress | plasma membrane | 62.0 | 64.58 |
| HORVU2Hr1G075350.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 17.09 | 54.65 |
| Solyc10g084830.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 49.82 | 51.8 |
| PGSC0003DMT400028760 | Potato | cytosol, peroxisome, plasma membrane | 49.64 | 51.61 |
| HORVU4Hr1G022660.1 | Barley | extracellular | 20.55 | 51.13 |
| GSMUA_Achr6P34060_001 | Banana | plasma membrane | 48.18 | 48.01 |
| AT2G39130.2 | Thale cress | cytosol, nucleus, plasma membrane | 46.91 | 46.91 |
| AT3G54830.1 | Thale cress | nucleus | 43.09 | 43.41 |
| Zm00001d032325_P001 | Maize | mitochondrion, plasma membrane, vacuole | 21.27 | 43.33 |
| EES17245 | Sorghum | cytosol, peroxisome, plasma membrane | 44.91 | 42.88 |
| AT2G41190.1 | Thale cress | cytosol, peroxisome, plasma membrane | 40.91 | 41.98 |
| HORVU5Hr1G020560.3 | Barley | plasma membrane | 44.36 | 41.22 |
| TraesCS5D01G091100.1 | Wheat | plasma membrane | 44.36 | 40.94 |
| TraesCS5B01G084900.1 | Wheat | plasma membrane | 44.0 | 40.4 |
| TraesCS5A01G081500.1 | Wheat | plasma membrane | 43.82 | 40.37 |
| Os12t0574000-01 | Rice | plasma membrane | 43.27 | 40.07 |
| Zm00001d041534_P002 | Maize | plasma membrane | 43.27 | 39.08 |
| Zm00001d030751_P001 | Maize | plasma membrane | 44.18 | 38.45 |
| AT5G15240.1 | Thale cress | plasma membrane | 29.45 | 38.3 |
| AT3G28960.2 | Thale cress | plasma membrane | 27.09 | 36.79 |
| Zm00001d031629_P001 | Maize | cytosol, plasma membrane, vacuole | 11.09 | 33.89 |
| AT5G16740.1 | Thale cress | plasma membrane | 24.73 | 31.92 |
| AT2G42005.1 | Thale cress | plasma membrane | 18.91 | 25.18 |
| AT4G38250.1 | Thale cress | plasma membrane | 18.91 | 23.85 |
| AT5G65990.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 18.18 | 23.42 |
| AT3G11900.2 | Thale cress | plasma membrane | 16.73 | 21.3 |
Protein Annotations
| MapMan:24.2.3.4.7 | EntrezGene:831862 | InterPro:AA_transpt_TM | ProteinID:AED90441.1 | EMBL:AK117421 | ProteinID:ANM69615.1 |
| ArrayExpress:AT5G02180 | EnsemblPlantsGene:AT5G02180 | RefSeq:AT5G02180 | TAIR:AT5G02180 | RefSeq:AT5G02180-TAIR-G | EnsemblPlants:AT5G02180.1 |
| TAIR:AT5G02180.1 | Unigene:At.33449 | ProteinID:CAB82991.1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006865 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 |
| RefSeq:NP_001331278.1 | RefSeq:NP_195838.2 | PFAM:PF01490 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF313 |
| UniProt:Q8GYS4 | TMHMM:TMhelix | UniParc:UPI00000ADD8D | SEG:seg | : | : |
Description
AVT1DAmino acid transporter AVT1D [Source:UniProtKB/Swiss-Prot;Acc:Q8GYS4]
Coordinates
chr5:+:430858..433821
Molecular Weight (calculated)
59670.8 Da
IEP (calculated)
4.782
GRAVY (calculated)
0.437
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLDEEFLHD RDHSFLTDDE ENQAALACSD DEHDGDDDGR RGGENSDSSS PLSRDRSDNN LSDVSNPPWP QSYRQSMDLL TGMTPPSVSF MPQSSSRRLA
101: SSFQKKQQSS FCDSLSSSSS KPLLSQPVPD KEETILPVNP QSQLKLSVTD LPLPEPNLCS FSQSVLNGTN VLCGLGLITM PYAIKESGWL GLPILLFFGV
201: ITCYTGVLMK RCLESSPGIQ TYPDIGQAAF GITGRFIISI LLYVELYAAC VEYIIMMSDN LSGLFPNVSL SIASGISLDS PQIFAILTTL LVLPTVWLKD
301: LSLLSYLSVG GVLASILLGI CLFWVGAVDG IGFHATGRVF DLSNLPVTIG IFGFGYSGHS VFPNIYSSMK DPSRFPLVLV ICFSFCTVLY IAVAVCGYTM
401: FGEAVESQFT LNMPKHFFPS KVAVWTAVIT PMTKYALTIT PIVMSLEELI PTAKMRSRGV SILFRTMLVT STLVVALSVP FFAIVAALIG SFLAMLVALI
501: FPCLCYLSIL KGKLSNTQIG LCIFIIVFGV VSGCCGTYSA ISRLANQMTD
101: SSFQKKQQSS FCDSLSSSSS KPLLSQPVPD KEETILPVNP QSQLKLSVTD LPLPEPNLCS FSQSVLNGTN VLCGLGLITM PYAIKESGWL GLPILLFFGV
201: ITCYTGVLMK RCLESSPGIQ TYPDIGQAAF GITGRFIISI LLYVELYAAC VEYIIMMSDN LSGLFPNVSL SIASGISLDS PQIFAILTTL LVLPTVWLKD
301: LSLLSYLSVG GVLASILLGI CLFWVGAVDG IGFHATGRVF DLSNLPVTIG IFGFGYSGHS VFPNIYSSMK DPSRFPLVLV ICFSFCTVLY IAVAVCGYTM
401: FGEAVESQFT LNMPKHFFPS KVAVWTAVIT PMTKYALTIT PIVMSLEELI PTAKMRSRGV SILFRTMLVT STLVVALSVP FFAIVAALIG SFLAMLVALI
501: FPCLCYLSIL KGKLSNTQIG LCIFIIVFGV VSGCCGTYSA ISRLANQMTD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.