CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052063_P003	Maize	plasma membrane	90.2	92.04
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	76.77	79.96
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	77.86	79.74
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	46.28	78.95
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	76.41	78.4
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	66.97	77.36
TraesCS6D01G331300.1	Wheat	plasma membrane	70.78	75.73
HORVU6Hr1G083720.2	Barley	plastid	77.86	73.71
TraesCS6B01G381900.1	Wheat	plasma membrane	66.61	71.82
EES07657	Sorghum	plasma membrane	65.34	68.97
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	64.25	65.56
PGSC0003DMT400080507	Potato	peroxisome	55.35	58.32
CDY35425	Canola	plasma membrane	54.99	58.27
Bra000217.1-P	Field mustard	plasma membrane	54.99	58.27
CDY22507	Canola	plasma membrane	54.81	58.08
VIT_08s0007g05210.t01	Wine grape	plasma membrane	54.08	57.64
CDY23868	Canola	cytosol, nucleus, plasma membrane	54.99	57.28
Solyc03g078150.2.1	Tomato	peroxisome	54.45	57.14
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	55.54	57.09
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.81	57.09
CDX79951	Canola	cytosol, nucleus, plasma membrane	54.81	57.09
CDY06942	Canola	cytosol, peroxisome, plasma membrane	55.17	56.93
CDY67831	Canola	cytosol, peroxisome, plasma membrane	54.99	56.85
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.99	56.74
KRH16006	Soybean	cytosol	32.12	51.91
KRH33027	Soybean	plasma membrane	54.81	51.8
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	42.65	51.09
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	40.83	50.45
KRH77523	Soybean	cytosol, nucleus, plasma membrane	40.65	47.36
KRH66774	Soybean	plasma membrane	22.32	46.07
KXG19641	Sorghum	plasma membrane	33.21	45.86
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	35.03	41.77
EER89806	Sorghum	cytosol, nucleus, plasma membrane	41.92	40.46
EES06091	Sorghum	plasma membrane	41.92	40.1
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	39.02	37.33
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	29.22	36.34
EES01014	Sorghum	plasma membrane	28.31	35.94
KXG25873	Sorghum	plasma membrane	41.38	34.65
EER98235	Sorghum	plastid	18.69	23.95
EER93207	Sorghum	plasma membrane	18.51	23.94
EES07473	Sorghum	plasma membrane	17.42	22.54
OQU82139	Sorghum	peroxisome	16.52	21.21
EES12671	Sorghum	plastid	17.79	19.76

Protein Annotations

MapMan:24.2.3.4.7	EntrezGene:8081963	InterPro:AA_transpt_TM	UniProt:C5XUB7	EnsemblPlants:EES07655	ProteinID:EES07655
ProteinID:EES07655.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490	PANTHER:PTHR22950
PANTHER:PTHR22950:SF358	EnsemblPlantsGene:SORBI_3004G325100	unigene:Sbi.10734	TMHMM:TMhelix	UniParc:UPI0001A8625C	RefSeq:XP_002454679.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:66052332..66058341

Molecular Weight (calculated)

60061.4 Da

IEP (calculated)

4.877

GRAVY (calculated)

0.242

Length

551 amino acids

Sequence
(BLAST)

001: MAPEKPRKEQ EQEKEEEEML LEDGGIEESP RRSFEDCGDS EEDRGEDDDD DDEERHRDGD GVGSPRSFQS QKWPQSYRET TDTYTIAASP SFGYLGPSTS
101: KYSLLDLGRS GLGSDLKLPL VSDKADGKQD SVKNLPKTLS SIRDERVSFQ LQHTGEIYIS QGCSVTQTVF NGINVLAGVG LLSTPFTIHE AGWTGLAVLA
201: CFAIVCCYTG ILLKHCFESK DGISSYPDIG EAAFGRIGRL LISIILYTEL YTYCVEFIIL EGDNLTSIFP KAGFDWLGIH VDGKHFFGVI TAILVLPTVW
301: LRDLRVLSYL SAGGVFATLL VFLSVGLVGA TDGIGFHSTG KVVNWSGMPF AIGIYGFCYS GHSVFPNIYQ SMSDRSKFPK ALFICFAICT AMYGSFAVIG
401: FLMFGENTLS QITLNLPKHS VASKVALWTT VINPFTKYAL LLNPLARSLE ELRPEGFLNE TSCSIILRTA LVASTVCIAF LLPFFGLVMA LIGSLLSILV
501: AVIMPALCFL KIAQNKATCS QVIASIGIII LGVISAALGT YSSVKRIAEN Y

Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.