CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66774	Soybean	plasma membrane	41.09	70.79
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	61.3	63.23
KRH27948	Soybean	plasma membrane	21.96	58.38
KRH77523	Soybean	cytosol, nucleus, plasma membrane	57.61	56.03
KRH16006	Soybean	cytosol	38.48	51.91
KRH33027	Soybean	plasma membrane	62.61	49.4
VIT_08s0007g05210.t01	Wine grape	plasma membrane	53.91	47.97
CDY67831	Canola	cytosol, peroxisome, plasma membrane	55.22	47.65
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	55.43	47.57
CDY06942	Canola	cytosol, peroxisome, plasma membrane	55.22	47.57
Bra000217.1-P	Field mustard	plasma membrane	53.7	47.5
CDY35425	Canola	plasma membrane	53.7	47.5
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.0	47.38
CDY22507	Canola	plasma membrane	53.26	47.12
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	33.04	47.06
PGSC0003DMT400080507	Potato	peroxisome	53.26	46.85
CDY23868	Canola	cytosol, nucleus, plasma membrane	53.48	46.5
CDX79951	Canola	cytosol, nucleus, plasma membrane	53.26	46.31
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	53.26	46.31
Solyc03g078150.2.1	Tomato	peroxisome	52.83	46.29
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	47.39	45.7
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	52.39	45.56
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	52.17	44.69
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	52.17	44.61
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	51.96	44.26
TraesCS6D01G331300.1	Wheat	plasma membrane	49.13	43.88
Zm00001d052063_P003	Maize	plasma membrane	50.87	43.33
Zm00001d018336_P002	Maize	plasma membrane	51.3	43.14
EES07657	Sorghum	plasma membrane	48.48	42.72
EES07655	Sorghum	plasma membrane	51.09	42.65
TraesCS6B01G381900.1	Wheat	plasma membrane	47.17	42.47
HORVU6Hr1G083720.2	Barley	plastid	52.39	41.41
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	46.96	40.91
KRH40411	Soybean	plasma membrane	21.52	36.8
KRG91942	Soybean	plasma membrane	40.22	34.01
KRH71649	Soybean	cytosol, nucleus, plasma membrane	39.35	33.39
KRH33248	Soybean	cytosol, nucleus, plasma membrane	38.91	33.03
KRH40095	Soybean	plasma membrane	30.22	32.63
KRH40094	Soybean	plasma membrane	29.78	32.08
KRH34828	Soybean	plasma membrane	38.91	31.91
KRH38592	Soybean	endoplasmic reticulum	16.52	31.8
KRH01177	Soybean	plasma membrane	29.35	31.47
KRG89633	Soybean	plasma membrane	27.61	31.2
KRH30199	Soybean	extracellular, plasma membrane	25.22	31.1
KRH75803	Soybean	mitochondrion	20.65	30.35
KRH30194	Soybean	plasma membrane	28.26	29.75
KRG98240	Soybean	plasma membrane	27.83	29.29
KRG98784	Soybean	plasma membrane	23.04	28.8
KRG99991	Soybean	cytosol, nucleus, peroxisome	17.39	28.07
KRH58803	Soybean	mitochondrion	22.83	22.83
KRG97383	Soybean	mitochondrion	23.04	22.46
KRH28932	Soybean	cytosol, plasma membrane	16.52	21.11
KRH31531	Soybean	mitochondrion	20.22	20.58
KRG96325	Soybean	plasma membrane	18.04	19.67
KRH68062	Soybean	plasma membrane	17.83	19.52
KRH39423	Soybean	plasma membrane	17.39	18.69
KRG99573	Soybean	cytosol, nucleus, plasma membrane	1.96	8.41

Protein Annotations

EMBL:ACUP02012078	EnsemblPlants:KRG95106	EnsemblPlantsGene:GLYMA_19G130500	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF358	PFAM:PF01490	ProteinID:KRG95106	ProteinID:KRG95106.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00029592F8	UniProt:K7MY53	MapMan:24.2.3.4.7	:

Description

hypothetical protein

Coordinates

chr19:-:39040257..39047387

Molecular Weight (calculated)

51180.7 Da

IEP (calculated)

4.986

GRAVY (calculated)

0.242

Length

460 amino acids

Sequence
(BLAST)

001: MAKNEYKERD SEFFMNKINE NEEEQDIEAI GYHSDINDQC GSDNEGNRRT EPDSSSSQIW PQSYREATDS YSISAAPNLE SIIRAPSVIY SSFIGGGGFG
101: GAGFGSKSYL EHDERTSFLS GEELANQGIT RRQSTWWEKA SIQMQIPEEL PVGYGCSLTQ TIFNGINVMA GVGLLSTPYT VKQAGWAGLV VMLFFALVCC
201: YTADLMKHCF ESREGIISYP DIGQAAFGRY GRLIVSIILY TELYSYCVEF IILEGDNLTR LFPGTSLHWG SFQLDSKHLF GILTALVILP TVWLRDLRII
301: SYLSAGGVVA TALITICVFL VGTTDSVGFH LTGPLVKWSG MPFAFGIYGF CFAGHSVFPN IYQSMADKRE FTKAVIASFI LCIFIYGSVA VMGYLMFGEG
401: TLSQITLNLP PDAFASKVAL WTIVISPLTK YPFFIVINYL FFIVQRGLMV FMRHFNLPFL

Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.