Factsheet for VIT_14s0108g00630.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00690.t01	Wine grape	plasma membrane	95.79	98.32
VIT_06s0061g00570.t01	Wine grape	plasma membrane	54.67	91.05
VIT_14s0108g00620.t01	Wine grape	plasma membrane	82.48	82.48
VIT_06s0009g01140.t01	Wine grape	plasma membrane	66.12	67.22
PGSC0003DMT400076795	Potato	plasma membrane	50.0	63.69
KRH40095	Soybean	plasma membrane	63.08	63.38
PGSC0003DMT400076791	Potato	plasma membrane	62.15	63.33
KRH40411	Soybean	plasma membrane	39.72	63.2
KRH01177	Soybean	plasma membrane	63.32	63.17
KRH40094	Soybean	plasma membrane	62.15	62.3
AT3G28960.2	Thale cress	plasma membrane	57.94	61.23
PGSC0003DMT400008751	Potato	plasma membrane	60.75	61.03
Solyc03g013440.2.1	Tomato	plasma membrane	49.3	60.98
Bra025369.1-P	Field mustard	plasma membrane	57.48	60.74
CDX86397	Canola	plasma membrane	57.48	60.74
CDX85233	Canola	plasma membrane	57.24	60.49
CDY44419	Canola	plasma membrane	57.01	60.25
Bra033075.1-P	Field mustard	plasma membrane	57.01	60.25
Solyc03g013160.2.1	Tomato	plasma membrane	59.81	60.09
KRH30199	Soybean	extracellular, plasma membrane	50.7	58.18
KRG98784	Soybean	plasma membrane	49.53	57.61
VIT_01s0026g02500.t01	Wine grape	plasma membrane	54.44	56.69
KRG98240	Soybean	plasma membrane	57.01	55.84
KRH30194	Soybean	plasma membrane	56.31	55.15
VIT_19s0027g01890.t01	Wine grape	plasma membrane	43.93	54.18
VIT_19s0027g01860.t01	Wine grape	plasma membrane, plastid	49.77	52.72
VIT_19s0027g01880.t01	Wine grape	plasma membrane	49.53	52.09
VIT_19s0027g01870.t01	Wine grape	plasma membrane, plastid	48.83	51.35
CDY04048	Canola	plasma membrane	56.31	41.55
KRH75803	Soybean	mitochondrion	30.37	41.53
VIT_08s0007g05210.t01	Wine grape	plasma membrane	39.72	32.88
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	41.36	31.44
VIT_05s0062g01150.t01	Wine grape	plasma membrane	30.61	30.18
VIT_03s0038g03900.t01	Wine grape	plasma membrane	22.2	22.3
VIT_05s0062g01130.t01	Wine grape	plasma membrane	16.59	22.12
VIT_07s0031g02140.t01	Wine grape	plasma membrane	20.79	21.09

Protein Annotations

EntrezGene:100255991	wikigene:100255991	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	ProteinID:CBI22205	ProteinID:CBI22205.3
UniProt:D7SXA8	EMBL:FN595239	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100255991
wikigene:LOC100255991	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	TIGR:TC70180	TMHMM:TMhelix
UniParc:UPI00015C9F9D	ArrayExpress:VIT_14s0108g00630	EnsemblPlantsGene:VIT_14s0108g00630	EnsemblPlants:VIT_14s0108g00630.t01	unigene:Vvi.26405	RefSeq:XP_002283468
RefSeq:XP_002283468.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:-:29357798..29359858

Molecular Weight (calculated)

47078.4 Da

IEP (calculated)

7.409

GRAVY (calculated)

0.661

Length

428 amino acids

Sequence
(BLAST)

001: MEAEQRDGFT LTLPLLHDDQ NHNKVEDIES NGRKQDVGST SFFKTCFNGL NALSGVGILS TPYALSSGGW LSLVLLLVIA TATFYTGLLL RRCMDAHPNI
101: RTYPDVGERA FGKMGRLLVS VFMYTELYLV ATGFLILEGD NLHNLFPNMG LEIWGLMIDG RQSFIIIVGL VILPSVWVNN LNILSYISAS GVLACIIILG
201: SILWTGAFDG VGFDEKGTSL NWQGIPTAVS LYAFCYCAHP VFPTLYTSMR KKHQFSNVLL VCFIFCTITY AAMAILGYLM FGSNVQSQIT LNLPIEKLSS
301: RIAIYTTLVN PISKYALMVT PIVDATENWL PYYYKKRPFS LIIRSTLVFS TIIVALTVPF FGSLMSLVGA FLSVTASILL PCLCYLKISG IYHKFGVELV
401: IIIGVVLMGI SAGIMGTYTS IVEIIGQL

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.