Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 5
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076791 | Potato | plasma membrane | 91.33 | 75.24 |
| VIT_14s0108g00690.t01 | Wine grape | plasma membrane | 60.4 | 50.12 |
| VIT_14s0108g00630.t01 | Wine grape | plasma membrane | 60.98 | 49.3 |
| KRH40411 | Soybean | plasma membrane | 38.15 | 49.07 |
| Solyc06g061260.1.1 | Tomato | plasma membrane | 26.88 | 48.19 |
| VIT_14s0108g00620.t01 | Wine grape | plasma membrane | 58.67 | 47.43 |
| KRH40095 | Soybean | plasma membrane | 57.23 | 46.48 |
| KRH01177 | Soybean | plasma membrane | 56.36 | 45.45 |
| KRG98784 | Soybean | plasma membrane | 48.27 | 45.38 |
| KRH40094 | Soybean | plasma membrane | 55.78 | 45.2 |
| VIT_06s0009g01140.t01 | Wine grape | plasma membrane | 54.05 | 44.42 |
| Solyc03g013160.2.1 | Tomato | plasma membrane | 54.62 | 44.37 |
| Bra025369.1-P | Field mustard | plasma membrane | 51.16 | 43.7 |
| CDX85233 | Canola | plasma membrane | 51.16 | 43.7 |
| CDX86397 | Canola | plasma membrane | 51.16 | 43.7 |
| AT5G15240.1 | Thale cress | plasma membrane | 52.6 | 43.03 |
| AT3G28960.2 | Thale cress | plasma membrane | 50.29 | 42.96 |
| Solyc05g053970.2.1 | Tomato | plasma membrane | 43.64 | 42.9 |
| Bra033075.1-P | Field mustard | plasma membrane | 50.0 | 42.72 |
| CDY44419 | Canola | plasma membrane | 50.0 | 42.72 |
| CDX85556 | Canola | plasma membrane | 51.73 | 41.72 |
| CDX91000 | Canola | plasma membrane | 51.73 | 41.63 |
| KRH30199 | Soybean | extracellular, plasma membrane | 43.64 | 40.48 |
| KRG98240 | Soybean | plasma membrane | 48.84 | 38.67 |
| VIT_06s0061g00570.t01 | Wine grape | plasma membrane | 28.61 | 38.52 |
| KRH30194 | Soybean | plasma membrane | 48.55 | 38.44 |
| Solyc03g063030.2.1 | Tomato | plasma membrane | 25.72 | 37.87 |
| Solyc03g063040.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 11.85 | 33.33 |
| Solyc05g050440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 15.61 | 31.58 |
| CDY04048 | Canola | plasma membrane | 50.29 | 30.0 |
| Solyc06g061270.1.1 | Tomato | cytosol, plasma membrane | 16.18 | 26.67 |
| Solyc03g078150.2.1 | Tomato | peroxisome | 39.02 | 25.71 |
| KRH75803 | Soybean | mitochondrion | 23.12 | 25.56 |
| Solyc10g084830.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 35.84 | 23.44 |
| Solyc11g008440.1.1 | Tomato | cytosol, nucleus, plasma membrane | 37.28 | 23.24 |
| Solyc09g098380.1.1 | Tomato | plasma membrane | 26.3 | 20.59 |
| Solyc03g032090.1.1 | Tomato | plasma membrane | 17.92 | 14.52 |
| Solyc02g082510.1.1 | Tomato | plasma membrane | 17.05 | 13.88 |
| Solyc02g082520.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 16.76 | 13.84 |
| Solyc10g048180.1.1 | Tomato | plasma membrane | 17.05 | 13.82 |
| Solyc03g063050.1.1 | Tomato | extracellular, plasma membrane | 7.8 | 10.15 |
Protein Annotations
| EnsemblPlants:Solyc03g013440.2.1 | EnsemblPlantsGene:Solyc03g013440.2 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF280 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002768535 |
| UniProt:K4BER5 | MapMan:24.2.3.4.7 | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:44654581..44658738
Molecular Weight (calculated)
38033.4 Da
IEP (calculated)
8.190
GRAVY (calculated)
0.733
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGSSNIRV RLLDNCYNNN NDGRIEDNTI SGPTSFSRTC FNGLNALSGF LILEGDNLQN LSGQLQIFGL DGKQCFVIII SLIILPTVWF NNMSILSYIS
101: ASGVLASILL LASILWAALF DGIGFQTSQT HFINWKGMPT AISLYAFCYC AHPVFPTLYT SMINPKKFSK VMFVCFLLCT ISYASMAIVG YLMFVPSVLS
201: QITLNLPINK ISSKVAIYTT LVNPIAKYSL MIKPLENSME NQLPIHYKTR VCSLLIRTIL VISTVIVALA IPFFGYLMSL VGAFLSVTAS IVLPCLCFLK
301: ISGIYQRLGF EQVFIVGIVI MGIAIMLAMF GLPTYTSVCG HPNSTD
101: ASGVLASILL LASILWAALF DGIGFQTSQT HFINWKGMPT AISLYAFCYC AHPVFPTLYT SMINPKKFSK VMFVCFLLCT ISYASMAIVG YLMFVPSVLS
201: QITLNLPINK ISSKVAIYTT LVNPIAKYSL MIKPLENSME NQLPIHYKTR VCSLLIRTIL VISTVIVALA IPFFGYLMSL VGAFLSVTAS IVLPCLCFLK
301: ISGIYQRLGF EQVFIVGIVI MGIAIMLAMF GLPTYTSVCG HPNSTD
001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF
Arabidopsis Description
AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.