Factsheet for VIT_05s0062g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
plasma membrane 4
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G068460.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	24.61	50.32
CDY08487	Canola	plasma membrane	57.32	44.12
CDY01068	Canola	plasma membrane	56.7	43.44
Bra034803.1-P	Field mustard	plasma membrane	57.63	43.33
Bra001425.1-P	Field mustard	plasma membrane	56.7	42.72
CDX73848	Canola	plasma membrane	56.7	42.72
CDY53922	Canola	plasma membrane	56.39	42.49
AT3G11900.2	Thale cress	plasma membrane	56.39	41.9
KRG96325	Soybean	plasma membrane	54.21	41.23
KRH68062	Soybean	plasma membrane	52.96	40.48
EER98235	Sorghum	plastid	52.96	39.53
TraesCS2D01G278600.1	Wheat	plasma membrane	51.71	39.52
HORVU5Hr1G053550.1	Barley	plasma membrane	51.71	39.43
TraesCS2B01G297200.1	Wheat	plasma membrane	51.4	39.29
TraesCS2A01G279700.1	Wheat	plasma membrane	51.4	39.29
Zm00001d019225_P001	Maize	plasma membrane	52.02	39.02
TraesCS5D01G485300.1	Wheat	plasma membrane	50.47	38.39
TraesCS5A01G176900.1	Wheat	plasma membrane	50.16	38.24
TraesCS5B01G173000.1	Wheat	plasma membrane	50.16	38.24
Os07t0231400-01	Rice	plasma membrane	42.99	38.23
TraesCS5B01G485500.1	Wheat	plasma membrane	50.16	37.88
Os03t0817200-01	Rice	plasma membrane	49.22	37.8
HORVU5Hr1G112210.1	Barley	plasma membrane	49.84	37.65
TraesCS5A01G472500.1	Wheat	plasma membrane	49.22	37.53
TraesCS5B01G485400.1	Wheat	plasma membrane	49.22	37.53
TraesCS5A01G472600.1	Wheat	plasma membrane	49.53	37.41
TraesCS5D01G485100.1	Wheat	plasma membrane	48.91	37.29
EER93207	Sorghum	plasma membrane	49.22	37.09
TraesCS5D01G180000.1	Wheat	plastid	41.43	34.46
HORVU5Hr1G112960.2	Barley	cytosol	35.51	32.57
GSMUA_Achr1P27880_001	Banana	nucleus, peroxisome, plasma membrane	31.78	29.23
HORVU2Hr1G068450.4	Barley	mitochondrion	38.32	29.08
VIT_07s0031g02140.t01	Wine grape	plasma membrane	33.96	25.83
VIT_03s0038g03900.t01	Wine grape	plasma membrane	31.78	23.94
VIT_06s0061g00570.t01	Wine grape	plasma membrane	16.82	21.01
VIT_14s0108g00690.t01	Wine grape	plasma membrane	21.81	16.79
VIT_14s0108g00630.t01	Wine grape	plasma membrane	22.12	16.59
VIT_19s0027g01860.t01	Wine grape	plasma membrane, plastid	20.56	16.34
VIT_01s0026g02500.t01	Wine grape	plasma membrane	20.87	16.3
VIT_14s0108g00620.t01	Wine grape	plasma membrane	21.18	15.89
VIT_06s0009g01140.t01	Wine grape	plasma membrane	20.25	15.44
VIT_19s0027g01880.t01	Wine grape	plasma membrane	18.38	14.5
VIT_19s0027g01870.t01	Wine grape	plasma membrane, plastid	18.38	14.5
VIT_19s0027g01890.t01	Wine grape	plasma membrane	15.26	14.12
VIT_08s0007g05210.t01	Wine grape	plasma membrane	22.43	13.93
VIT_05s0062g01150.t01	Wine grape	plasma membrane	17.76	13.13
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	21.81	12.43
TraesCS2A01G279600.1	Wheat	plasma membrane	0.0	0.0

Protein Annotations

MapMan:24.2.3.4.4	InterPro:AA_transpt_TM	ProteinID:CCB61817	ProteinID:CCB61817.1	UniProt:F6I4A2	EMBL:FN596745
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006810	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0009624	GO:GO:0015171	GO:GO:0015173	GO:GO:0015175	GO:GO:0015801
GO:GO:0015804	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF462
TMHMM:TMhelix	UniParc:UPI000210AAF7	ArrayExpress:VIT_05s0062g01130	EnsemblPlantsGene:VIT_05s0062g01130	EnsemblPlants:VIT_05s0062g01130.t01	:

Description

No Description!

Coordinates

chr5:+:19809629..19811318

Molecular Weight (calculated)

34693.6 Da

IEP (calculated)

6.844

GRAVY (calculated)

0.540

Length

321 amino acids

Sequence
(BLAST)

001: MEAHGKSAET PLLGSSHRGT ASSIQTLGNI LVSIVGTGVL GLPFAFRVAG WLAGTVGVIV TGLSTCYCML ILVQCRKRLV CGEEKTYGDL GYECLGKPGR
101: YLTEFLIFIS YCGGSVAYLK FIGQTLASVF SGMTFTSFIF CLVPIEIMLS WIRTLSALSP FTIFADVCNV AAIAMVVKED VQVLWGSGSD IGERRALSPT
201: IAGLPFGAGV AVFCFEGFGM TLALEGSMRE RDAFTRVLIQ AFCGLTTVYV LFGLIGYLAY GDQTLDIATL NLPQGWSSMV VQRPNQDCSQ REENNALIIL
301: SHWNKCLRVI IPLSLSKTLD H

Best Arabidopsis Sequence Match ( AT3G11900.2 )
(BLAST)

001: MAIKDLTATT GDSSLPLIKS PPSETTGGDR TSALQTLGNI IVSIVGTGVL GLPYAFRIAG WLAGSLGVII VGFATYYCML LLIQCRDKLE SEEGEEESKT
101: YGDLGFKCMG TKGRYLTEFL IFTAQCGGSV AYLVFIGRNL SSIFSSYGLS MVSFILILVP IEVGLSWITS LSALSPFSIF ADICNIIAMC FVVKENVEMV
201: IEGDFSFSDR TAISSTIGGL PFAGGVAVFC FEGFAMTLAL ESSMREREAF PKLLAKVLAG ITFVYVLFGF CGYMAYGDQT KDIITLNLPN NWSAIAVQIG
301: LCVGLTFTFP IMVHPLNEII EQKLKRIDWL QKHHNGYSNE TGSVSKFAIF TTRTLLVVGL AAIASLVPGF GTFASLVGST LCALISFVLP ASYHLTLLGP
401: SLNVWNKSID VFIVICGLIF AVYGTYNTIV GV

Arabidopsis Description

ANT1Amino acid transporter ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF09]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.