Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- mitochondrion 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G032760.1 | Barley | cytosol | 7.12 | 5.26 |
| Os04t0492300-01 | Rice | nucleus | 23.13 | 4.7 |
| Os02t0152800-01 | Rice | cytosol | 7.12 | 4.1 |
| Os05t0151000-00 | Rice | nucleus | 24.91 | 3.8 |
| TraesCS5B01G420400.1 | Wheat | nucleus | 18.86 | 3.44 |
| Os06t0612200-01 | Rice | nucleus | 2.85 | 3.38 |
| TraesCS3D01G522400.1 | Wheat | plastid | 19.22 | 3.35 |
| TraesCS3A01G513100.1 | Wheat | plastid | 19.22 | 3.26 |
| TraesCS3B01G581800.1 | Wheat | nucleus | 17.44 | 3.19 |
| HORVU3Hr1G112670.15 | Barley | nucleus | 13.52 | 2.97 |
| Os01t0965000-00 | Rice | nucleus | 15.66 | 2.84 |
| Os09t0555200-01 | Rice | cytosol | 1.78 | 1.57 |
| Os04t0572600-01 | Rice | cytosol | 1.78 | 1.11 |
| Os02t0152700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4328328 | ProteinID:BAD38598.1 | ProteinID:BAF07833.1 | ProteinID:BAS77020.1 | InterPro:DUF2343 |
| ProteinID:EEE56319.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006810 | GO:GO:0006813 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031305 |
| EnsemblPlantsGene:Os02g0152600 | EnsemblPlants:Os02t0152600-01 | PFAM:PF10173 | PANTHER:PTHR28062 | UniProt:Q67IU3 | TMHMM:TMhelix |
| UniParc:UPI00004265C6 | RefSeq:XP_015625444.1 | SEG:seg | : | : | : |
Description
Protein of unknown function DUF2343 domain containing protein. (Os02t0152600-01)
Coordinates
chr2:-:2898897..2903751
Molecular Weight (calculated)
31295.0 Da
IEP (calculated)
10.182
GRAVY (calculated)
-0.178
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MQARVVVFPV KGRAWCFASP RATAPAAACG GGDGGALLPP PPPTVKDLWR GIAGGGRTAS ENAEAVVDFV ADKMNRAWIG FGSAPEGSMK NRIHSFGLKL
101: LSRVRPSEVL LKSVTKDVSL LEIVHPASIN PRLVRRRLRH IAVRGASVHR KFLYGSVCLL PVTSVFMVLP LPNIPFFWVL FRAYSHWRAL QGSERLQLLV
201: SDSSDQWKIL LEKQKEMSSR KDGNPCENTQ YAPWNLQPSK KLDGFLESRK LNEGLDCDTI SRICQAYDLD KIDVLKYRDL E
101: LSRVRPSEVL LKSVTKDVSL LEIVHPASIN PRLVRRRLRH IAVRGASVHR KFLYGSVCLL PVTSVFMVLP LPNIPFFWVL FRAYSHWRAL QGSERLQLLV
201: SDSSDQWKIL LEKQKEMSSR KDGNPCENTQ YAPWNLQPSK KLDGFLESRK LNEGLDCDTI SRICQAYDLD KIDVLKYRDL E
001: MRARLVVFPI KGKKWCFSRS VDPFAAQSPS GVTPTTVRGL WKKISSESKP INANAELLVD FISDKMNKAW VGLEKAPDGS IKNKIHGFGL KLLARVKPSE
101: IFLKSISKEV TSVQVTYPPS LDPRLVRRRL RHIAMSGTIL HKKYLVGSVT LLPLTSAFMV LPLPNIPFFW VLFRTYSHWR ALQGSEKLLK LISNEANPDK
201: PDSTDDADES KNSNTKPEQK SQSPTCILLP SEELYQLIRE ASEEGLDEAT IIEICKSFDL NKNDVLKYRN LV
101: IFLKSISKEV TSVQVTYPPS LDPRLVRRRL RHIAMSGTIL HKKYLVGSVT LLPLTSAFMV LPLPNIPFFW VLFRTYSHWR ALQGSEKLLK LISNEANPDK
201: PDSTDDADES KNSNTKPEQK SQSPTCILLP SEELYQLIRE ASEEGLDEAT IIEICKSFDL NKNDVLKYRN LV
Arabidopsis Description
K+-H+ exchange-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C8N0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.