Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92362 | Soybean | nucleus, plastid | 18.56 | 11.7 |
| Bra014946.1-P | Field mustard | plastid | 19.16 | 11.55 |
| CDX77518 | Canola | plastid | 19.16 | 11.55 |
| Os11t0595200-01 | Rice | plastid | 18.56 | 11.48 |
| CDX85096 | Canola | plastid | 18.56 | 11.36 |
| VIT_05s0049g01360.t01 | Wine grape | plastid | 19.16 | 10.92 |
| AT3G23400.1 | Thale cress | plastid | 18.56 | 10.92 |
| PGSC0003DMT400044209 | Potato | plastid | 16.77 | 10.18 |
| Solyc09g090330.2.1 | Tomato | plastid | 16.77 | 10.14 |
| GSMUA_Achr10P... | Banana | plastid | 15.57 | 9.45 |
| KRH34425 | Soybean | plastid | 13.17 | 9.21 |
| Os05t0304200-01 | Rice | cytosol | 8.38 | 8.92 |
Protein Annotations
| EnsemblPlants:Os05t0228900-01 | EnsemblPlantsGene:Os05g0228900 | ProteinID:AAT93836.1 | ProteinID:BAF16886.1 | ProteinID:BAS92908.1 | SEG:seg |
| UniParc:UPI0000351DBB | UniProt:Q6AT06 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein. (Os05t0228900-01)
Coordinates
chr5:-:7845334..7846279
Molecular Weight (calculated)
18557.8 Da
IEP (calculated)
12.177
GRAVY (calculated)
-0.720
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPKREYSSN IRDNLIRENL ADGAIPLRTR AVTLWLPFFF HRTPFLSPSL TGGGSTRARQ ASSGRAQAIV RASRRRERAS MGEPTTGGRE QGRDQASGRG
101: TRAWASRRWE HACRGEPAAA TAVSNQPRSA IGLQRQQHAR SSFSNPPRIP TTTLDGDFVS DLYMFFQ
101: TRAWASRRWE HACRGEPAAA TAVSNQPRSA IGLQRQQHAR SSFSNPPRIP TTTLDGDFVS DLYMFFQ
001: MGPYLGPMRK ILLYLPTKKA VSVLSKRWKS LWLSFPGLDF DSEEFPNYNA FVSFMDRFVD FSRERKSCLH KLKLSIQKSW SDQYRITRLE SISLPRLKTV
101: HLQLNVYAND AGLESFISSY PAHEDFSIVR SVDIDDNVNV LRVHSQTLTS LSVEFDLGEW GLGLLCFGQR YLGLWIDDPR FKYLNFKHEL SDSKTISNLN
201: SLVKVNFVGF YMSHGVGLSK QQMARNVFTG ISRVRDLIIS ADIFIDCYLK EESLPQFCNL SCLKAEVCSS NVKIRETLQK PFESCPNLKS IFLVMTCTNP
301: RALT
101: HLQLNVYAND AGLESFISSY PAHEDFSIVR SVDIDDNVNV LRVHSQTLTS LSVEFDLGEW GLGLLCFGQR YLGLWIDDPR FKYLNFKHEL SDSKTISNLN
201: SLVKVNFVGF YMSHGVGLSK QQMARNVFTG ISRVRDLIIS ADIFIDCYLK EESLPQFCNL SCLKAEVCSS NVKIRETLQK PFESCPNLKS IFLVMTCTNP
301: RALT
Arabidopsis Description
Leucine Rich Repeat protein family [Source:UniProtKB/TrEMBL;Acc:Q9FNK2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.