Factsheet for Bra014946.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77518	Canola	plastid	100.0	100.0
CDX85096	Canola	plastid	95.31	96.7
AT3G23400.1	Thale cress	plastid	75.81	73.94
Solyc09g090330.2.1	Tomato	plastid	62.09	62.32
Zm00001d007581_P001	Maize	plastid	61.01	62.13
KRG92362	Soybean	nucleus, plastid	59.21	61.89
PGSC0003DMT400044209	Potato	plastid	61.37	61.82
Os11t0595200-01	Rice	plastid	58.48	60.0
EES08771	Sorghum	plastid	61.73	58.97
GSMUA_Achr10P...	Banana	plastid	57.4	57.82
KRH34425	Soybean	plastid	49.82	57.74
VIT_05s0049g01360.t01	Wine grape	plastid	61.01	57.68
TraesCS2B01G171300.1	Wheat	plastid	55.23	55.43
TraesCS2A01G145900.1	Wheat	plastid	54.51	54.91
HORVU0Hr1G039090.1	Barley	plastid	54.87	54.87
TraesCS2D01G150500.1	Wheat	plastid	54.51	54.51
Os05t0304200-01	Rice	cytosol	18.05	31.85
Os05t0228900-01	Rice	cytosol	11.55	19.16

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra014946	EnsemblPlants:Bra014946.1	EnsemblPlants:Bra014946.1-P	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006950	GO:GO:0008150
GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009605
GO:GO:0009607	GO:GO:0009658	GO:GO:0009941	GO:GO:0009987	GO:GO:0010193	GO:GO:0010287
GO:GO:0016020	GO:GO:0016043	GO:GO:0031977	GO:GO:0042742	UniProt:M4DEM4	InterPro:PAP/fibrillin_dom
PFAM:PF04755	PANTHER:PTHR31906	PANTHER:PTHR31906:SF15	UniParc:UPI0002540E6B	SEG:seg	:

Description

AT3G23400 (E=6e-083) | plastid-lipid associated protein PAP / fibrillin family protein

Coordinates

chrA07:+:5031792..5033033

Molecular Weight (calculated)

29880.7 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.173

Length

277 amino acids

Sequence
(BLAST)

001: MAASSALSSP ARLSNNRSPP SCGSVRRSIS SSPVLIATPR SSRLSFTIPE RRSLVVNSTV GEVSFREPET SGDKEGIESL KLKLLSVVSG LNRGLVASVD
101: DLQRAEAAAK LLEAAGGPVD LTNDLDKLQG KWRLLYSSAF SSRSLGGSRP GLPTGRLIPV TLGQVFQRID VFSKDFDNIA EVELGAPWPF PPLEATATLA
201: HKFELLGTCK IKITFEKTTV KTSGNLAQIP PFEIPRLPDS FRPPSNPGTG DFEVTYVDEN MRITRGDRGE LRVFVIA

Best Arabidopsis Sequence Match ( AT3G23400.1 )
(BLAST)

001: MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV EVSIGGESDP PPSSSGSGGD DKQIALLKLK LLSVVSGLNR
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA

Arabidopsis Description

PAP6Plastid-lipid-associated protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LW57]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.