CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92362	Soybean	nucleus, plastid	72.38	65.28
Zm00001d007581_P001	Maize	plastid	66.53	58.46
Os11t0595200-01	Rice	plastid	64.44	57.04
Solyc09g090330.2.1	Tomato	plastid	64.44	55.8
GSMUA_Achr10P...	Banana	plastid	64.02	55.64
PGSC0003DMT400044209	Potato	plastid	64.02	55.64
VIT_05s0049g01360.t01	Wine grape	plastid	65.69	53.58
EES08771	Sorghum	plastid	62.34	51.38
TraesCS2A01G145900.1	Wheat	plastid	59.0	51.27
HORVU0Hr1G039090.1	Barley	plastid	58.58	50.54
TraesCS2B01G171300.1	Wheat	plastid	58.16	50.36
TraesCS2D01G150500.1	Wheat	plastid	58.16	50.18
Bra014946.1-P	Field mustard	plastid	57.74	49.82
CDX77518	Canola	plastid	57.74	49.82
CDX85096	Canola	plastid	56.49	49.45
AT3G23400.1	Thale cress	plastid	56.9	47.89
Os05t0304200-01	Rice	cytosol	20.08	30.57
Os05t0228900-01	Rice	cytosol	9.21	13.17

Protein Annotations

EMBL:ACUP02006597	EnsemblPlants:KRH34425	EnsemblPlantsGene:GLYMA_10G182900	InterPro:PAP/fibrillin_dom	PANTHER:PTHR31906	PANTHER:PTHR31906:SF15
PFAM:PF04755	ProteinID:KRH34425	ProteinID:KRH34425.1	SEG:seg	UniParc:UPI00023CDD29	UniProt:A0A0R0I2J7
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:41602272..41604035

Molecular Weight (calculated)

25280.1 Da

IEP (calculated)

5.983

GRAVY (calculated)

-0.016

Length

239 amino acids

Sequence
(BLAST)

001: MSLLSASFTA STPIALASSS SLSSRPTARS ILGDGNTSDS ISTVGVADSS PSSSGYAGNT SDSISSLKLN LLELEAGGGF VNLSLGLENL QGRWKLIYSS
101: AFSSRTLGGS RPGPPIGRLL PITLGQVFQR IDILSKDFDN IVELQLGAPW PLQPLEVTAT LAHKFELIGS SKIKIVFEKT TMKTAGNLSQ LPPLEVPRIP
201: DALRPPSNTG SGEFEVTYLD SDTRITRGDR GELRVFVIA

Best Arabidopsis Sequence Match ( AT3G23400.1 )
(BLAST)

001: MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV EVSIGGESDP PPSSSGSGGD DKQIALLKLK LLSVVSGLNR
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA

Arabidopsis Description

PAP6Plastid-lipid-associated protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LW57]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.