Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014946.1-P | Field mustard | plastid | 96.7 | 95.31 |
| CDX77518 | Canola | plastid | 96.7 | 95.31 |
| AT3G23400.1 | Thale cress | plastid | 75.46 | 72.54 |
| Solyc09g090330.2.1 | Tomato | plastid | 61.9 | 61.23 |
| KRG92362 | Soybean | nucleus, plastid | 59.34 | 61.13 |
| PGSC0003DMT400044209 | Potato | plastid | 61.17 | 60.73 |
| Zm00001d007581_P001 | Maize | plastid | 60.44 | 60.66 |
| Os11t0595200-01 | Rice | plastid | 58.24 | 58.89 |
| EES08771 | Sorghum | plastid | 61.54 | 57.93 |
| VIT_05s0049g01360.t01 | Wine grape | plastid | 61.9 | 57.68 |
| GSMUA_Achr10P... | Banana | plastid | 57.51 | 57.09 |
| KRH34425 | Soybean | plastid | 49.45 | 56.49 |
| TraesCS2B01G171300.1 | Wheat | plastid | 54.21 | 53.62 |
| TraesCS2A01G145900.1 | Wheat | plastid | 53.85 | 53.45 |
| HORVU0Hr1G039090.1 | Barley | plastid | 53.85 | 53.07 |
| TraesCS2D01G150500.1 | Wheat | plastid | 53.85 | 53.07 |
| Os05t0304200-01 | Rice | cytosol | 17.58 | 30.57 |
| Os05t0228900-01 | Rice | cytosol | 11.36 | 18.56 |
Protein Annotations
| EnsemblPlants:CDX85096 | EnsemblPlantsGene:GSBRNA2T00142569001 | InterPro:PAP/fibrillin_dom | PANTHER:PTHR31906 | PANTHER:PTHR31906:SF15 | PFAM:PF04755 |
| ProteinID:CDX85096 | ProteinID:CDX85096.1 | SEG:seg | UniParc:UPI0004EE40F2 | MapMan:35.1 | : |
Description
BnaC07g08100D
Coordinates
chrLK031840:-:344175..345711
Molecular Weight (calculated)
29504.5 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.111
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSALSSP ALLSNNRSPP SCGSVRCSMS SSPVLIATPR SSRLRFTIPE RRSLVVKSTV GEVSFREPET SGMESLKLKL LSVVSGLNRG LVASVDDLQS
101: AEAAAKLLEA AGGPVDLTND LDKLQGKWRL LYSSAFSSRS LGGSRPGLPT GRLIPVTLGQ VFQRIDVFSK DFDNIAEVEI GAPWPFPPLE ATATLAHKFE
201: LLGTCKIKIT FEKTTVKTSG NLAQIPPFEI PRLPDSFRPP SNPRTGDFEV TYVDENMRIT RGDRGELRVF VIA
101: AEAAAKLLEA AGGPVDLTND LDKLQGKWRL LYSSAFSSRS LGGSRPGLPT GRLIPVTLGQ VFQRIDVFSK DFDNIAEVEI GAPWPFPPLE ATATLAHKFE
201: LLGTCKIKIT FEKTTVKTSG NLAQIPPFEI PRLPDSFRPP SNPRTGDFEV TYVDENMRIT RGDRGELRVF VIA
001: MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV EVSIGGESDP PPSSSGSGGD DKQIALLKLK LLSVVSGLNR
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
Arabidopsis Description
PAP6Plastid-lipid-associated protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LW57]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.