Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g090330.2.1 | Tomato | plastid | 93.45 | 93.12 |
| KRG92362 | Soybean | nucleus, plastid | 65.45 | 67.92 |
| Zm00001d007581_P001 | Maize | plastid | 64.0 | 64.71 |
| KRH34425 | Soybean | plastid | 55.64 | 64.02 |
| Os11t0595200-01 | Rice | plastid | 61.45 | 62.59 |
| Bra014946.1-P | Field mustard | plastid | 61.82 | 61.37 |
| CDX77518 | Canola | plastid | 61.82 | 61.37 |
| CDX85096 | Canola | plastid | 60.73 | 61.17 |
| VIT_05s0049g01360.t01 | Wine grape | plastid | 65.09 | 61.09 |
| GSMUA_Achr10P... | Banana | plastid | 60.36 | 60.36 |
| EES08771 | Sorghum | plastid | 61.82 | 58.62 |
| TraesCS2A01G145900.1 | Wheat | plastid | 58.18 | 58.18 |
| HORVU0Hr1G039090.1 | Barley | plastid | 58.18 | 57.76 |
| AT3G23400.1 | Thale cress | plastid | 58.91 | 57.04 |
| TraesCS2B01G171300.1 | Wheat | plastid | 57.09 | 56.88 |
| TraesCS2D01G150500.1 | Wheat | plastid | 56.73 | 56.32 |
| Os05t0304200-01 | Rice | cytosol | 17.82 | 31.21 |
| Os05t0228900-01 | Rice | cytosol | 10.18 | 16.77 |
Protein Annotations
| EMBL:AY387685 | EnsemblPlants:PGSC0003DMT400044209 | EnsemblPlantsGene:PGSC0003DMG400017164 | EntrezGene:102577697 | InterPro:PAP/fibrillin_dom | ncoils:Coil |
| PANTHER:PTHR31906 | PANTHER:PTHR31906:SF15 | PFAM:PF04755 | PGSC:PGSC0003DMG400017164 | ProteinID:AAR26486 | ProteinID:AAR26486.1 |
| RefSeq:NP_001274864.1 | SEG:seg | UniParc:UPI0000495FC7 | UniProt:Q5QJA7 | MapMan:35.1 | : |
Description
Harpin binding protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400017164]
Coordinates
chr9:-:56633867..56638761
Molecular Weight (calculated)
30092.9 Da
IEP (calculated)
8.332
GRAVY (calculated)
-0.291
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLHSRLP LSHNHSLSNS CQSFPCHLPG RSKRSTQRFF EERSYDSKRA LICQSGIDEV TFRLPGSKEA KAELIGSLKL KLLSAVSGLN RGLAASEDDL
101: KKADEAAKEL ESCAGAVDLA ADLDKLQGRW KLIYSSAFSS RTLGGSRPGP PTGRLLPITL GQVFQRIDVL SKDFDNIVEL ELGAPWPFPP VEATATLAHK
201: FELIGSSTIK IVFEKTTVKT TGNLSQLPPI EVPRIPDQFR PPSNTGNGEF EVTYIDSDTR VTRGDRGELR VFVIS
101: KKADEAAKEL ESCAGAVDLA ADLDKLQGRW KLIYSSAFSS RTLGGSRPGP PTGRLLPITL GQVFQRIDVL SKDFDNIVEL ELGAPWPFPP VEATATLAHK
201: FELIGSSTIK IVFEKTTVKT TGNLSQLPPI EVPRIPDQFR PPSNTGNGEF EVTYIDSDTR VTRGDRGELR VFVIS
001: MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV EVSIGGESDP PPSSSGSGGD DKQIALLKLK LLSVVSGLNR
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
Arabidopsis Description
PAP6Plastid-lipid-associated protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LW57]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.