Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92362 | Soybean | nucleus, plastid | 65.19 | 72.08 |
| Os11t0595200-01 | Rice | plastid | 62.46 | 67.78 |
| Zm00001d007581_P001 | Maize | plastid | 62.46 | 67.28 |
| Solyc09g090330.2.1 | Tomato | plastid | 63.14 | 67.03 |
| KRH34425 | Soybean | plastid | 53.58 | 65.69 |
| PGSC0003DMT400044209 | Potato | plastid | 61.09 | 65.09 |
| GSMUA_Achr10P... | Banana | plastid | 60.07 | 64.0 |
| CDX85096 | Canola | plastid | 57.68 | 61.9 |
| Bra014946.1-P | Field mustard | plastid | 57.68 | 61.01 |
| CDX77518 | Canola | plastid | 57.68 | 61.01 |
| TraesCS2A01G145900.1 | Wheat | plastid | 57.0 | 60.73 |
| EES08771 | Sorghum | plastid | 59.39 | 60.0 |
| HORVU0Hr1G039090.1 | Barley | plastid | 56.66 | 59.93 |
| TraesCS2D01G150500.1 | Wheat | plastid | 56.31 | 59.57 |
| TraesCS2B01G171300.1 | Wheat | plastid | 55.97 | 59.42 |
| AT3G23400.1 | Thale cress | plastid | 54.27 | 55.99 |
| Os05t0304200-01 | Rice | cytosol | 18.09 | 33.76 |
| Os05t0228900-01 | Rice | cytosol | 10.92 | 19.16 |
Protein Annotations
| EntrezGene:100254627 | wikigene:100254627 | MapMan:35.1 | EMBL:AM474526 | ProteinID:CAN66121 | ProteinID:CAN66121.1 |
| ProteinID:CBI23672 | ProteinID:CBI23672.3 | ncoils:Coil | UniProt:D7SZJ5 | EMBL:FN595496 | EntrezGene:LOC100254627 |
| wikigene:LOC100254627 | InterPro:PAP/fibrillin_dom | PFAM:PF04755 | PANTHER:PTHR31906 | PANTHER:PTHR31906:SF15 | TIGR:TC70181 |
| UniParc:UPI00015C75DE | ArrayExpress:VIT_05s0049g01360 | EnsemblPlantsGene:VIT_05s0049g01360 | EnsemblPlants:VIT_05s0049g01360.t01 | unigene:Vvi.17154 | RefSeq:XP_002285326 |
| RefSeq:XP_002285326.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:8615230..8617908
Molecular Weight (calculated)
31526.7 Da
IEP (calculated)
8.458
GRAVY (calculated)
-0.166
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSLLHPLTS FSLSPSPPPP LSSSSSSSST ITITCALPSN LRSSDRRRLR TTSKPYTWTS GLPKRSFVLR STLDEVSVLD PPPPPEDSTA DLLSSLKLKL
101: LSAVSGLNRG LAAIEDDLQK ADAAAKELEA AGGTVDLSID LDKLQGRWKL IYSSAFSSRT LGGSRPGPPT GRLLPITLGQ VFQRIDIVSK DFDNIVDLQI
201: GAPWPLPPIE LTATLAHKFE LIGTSSIKIT FEKTTVKTTG NLSQLPPLEV PRIPDALRPP SNTGSGEFEV TYLDADTRIT RGDRGELRVF VIA
101: LSAVSGLNRG LAAIEDDLQK ADAAAKELEA AGGTVDLSID LDKLQGRWKL IYSSAFSSRT LGGSRPGPPT GRLLPITLGQ VFQRIDIVSK DFDNIVDLQI
201: GAPWPLPPIE LTATLAHKFE LIGTSSIKIT FEKTTVKTTG NLSQLPPLEV PRIPDALRPP SNTGSGEFEV TYLDADTRIT RGDRGELRVF VIA
001: MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV EVSIGGESDP PPSSSGSGGD DKQIALLKLK LLSVVSGLNR
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
Arabidopsis Description
PAP6Plastid-lipid-associated protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LW57]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.