Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014946.1-P | Field mustard | plastid | 100.0 | 100.0 |
| CDX85096 | Canola | plastid | 95.31 | 96.7 |
| AT3G23400.1 | Thale cress | plastid | 75.81 | 73.94 |
| Solyc09g090330.2.1 | Tomato | plastid | 62.09 | 62.32 |
| Zm00001d007581_P001 | Maize | plastid | 61.01 | 62.13 |
| KRG92362 | Soybean | nucleus, plastid | 59.21 | 61.89 |
| PGSC0003DMT400044209 | Potato | plastid | 61.37 | 61.82 |
| Os11t0595200-01 | Rice | plastid | 58.48 | 60.0 |
| EES08771 | Sorghum | plastid | 61.73 | 58.97 |
| GSMUA_Achr10P... | Banana | plastid | 57.4 | 57.82 |
| KRH34425 | Soybean | plastid | 49.82 | 57.74 |
| VIT_05s0049g01360.t01 | Wine grape | plastid | 61.01 | 57.68 |
| TraesCS2B01G171300.1 | Wheat | plastid | 55.23 | 55.43 |
| TraesCS2A01G145900.1 | Wheat | plastid | 54.51 | 54.91 |
| HORVU0Hr1G039090.1 | Barley | plastid | 54.87 | 54.87 |
| TraesCS2D01G150500.1 | Wheat | plastid | 54.51 | 54.51 |
| Os05t0304200-01 | Rice | cytosol | 18.05 | 31.85 |
| Os05t0228900-01 | Rice | cytosol | 11.55 | 19.16 |
Protein Annotations
| EnsemblPlants:CDX77518 | EnsemblPlantsGene:GSBRNA2T00128405001 | InterPro:PAP/fibrillin_dom | PANTHER:PTHR31906 | PANTHER:PTHR31906:SF15 | PFAM:PF04755 |
| ProteinID:CDX77518 | ProteinID:CDX77518.1 | SEG:seg | UniParc:UPI0002540E6B | MapMan:35.1 | : |
Description
BnaA07g06560D
Coordinates
chrLK031811:+:1440583..1442066
Molecular Weight (calculated)
29880.7 Da
IEP (calculated)
9.606
GRAVY (calculated)
-0.173
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSALSSP ARLSNNRSPP SCGSVRRSIS SSPVLIATPR SSRLSFTIPE RRSLVVNSTV GEVSFREPET SGDKEGIESL KLKLLSVVSG LNRGLVASVD
101: DLQRAEAAAK LLEAAGGPVD LTNDLDKLQG KWRLLYSSAF SSRSLGGSRP GLPTGRLIPV TLGQVFQRID VFSKDFDNIA EVELGAPWPF PPLEATATLA
201: HKFELLGTCK IKITFEKTTV KTSGNLAQIP PFEIPRLPDS FRPPSNPGTG DFEVTYVDEN MRITRGDRGE LRVFVIA
101: DLQRAEAAAK LLEAAGGPVD LTNDLDKLQG KWRLLYSSAF SSRSLGGSRP GLPTGRLIPV TLGQVFQRID VFSKDFDNIA EVELGAPWPF PPLEATATLA
201: HKFELLGTCK IKITFEKTTV KTSGNLAQIP PFEIPRLPDS FRPPSNPGTG DFEVTYVDEN MRITRGDRGE LRVFVIA
001: MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV EVSIGGESDP PPSSSGSGGD DKQIALLKLK LLSVVSGLNR
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
101: GLVASVDDLE RAEVAAKELE TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS KDFDNIAEVE LGAPWPFPPL
201: EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA
Arabidopsis Description
PAP6Plastid-lipid-associated protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LW57]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.