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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER99353 Sorghum cytosol 77.67 77.3
TraesCS5A01G363500.1 Wheat cytosol 73.35 73.7
TraesCS5B01G365600.1 Wheat cytosol 73.11 73.55
Zm00001d021378_P007 Maize cytosol 74.43 73.11
TraesCS5D01G372700.1 Wheat cytosol 72.75 73.1
HORVU5Hr1G089280.1 Barley cytosol 72.87 72.78
GSMUA_Achr9P23120_001 Banana mitochondrion 42.98 42.67
GSMUA_Achr4P12500_001 Banana mitochondrion 29.65 41.79
VIT_11s0065g00460.t01 Wine grape cytosol 39.02 39.11
Solyc07g042580.2.1 Tomato cytosol 38.78 38.78
PGSC0003DMT400035319 Potato nucleus 36.25 38.04
KRH74132 Soybean cytosol, endoplasmic reticulum, nucleus 34.57 35.78
AT2G07170.1 Thale cress cytosol 34.45 35.0
CDY38410 Canola nucleus 32.65 34.65
CDX78782 Canola nucleus 34.09 33.93
Os02t0739900-01 Rice cytosol, mitochondrion 16.93 23.04
Os07t0520400-01 Rice cytosol, mitochondrion, nucleus, plastid 24.37 22.68
Os06t0244700-01 Rice cytosol 12.48 19.7
Protein Annotations
Gene3D:1.25.10.10MapMan:35.1EntrezGene:4347846EMBL:AK073825InterPro:ARM-likeInterPro:ARM-type_fold
ProteinID:BAD45957.1ProteinID:BAF25836.1ProteinID:BAT09392.1ncoils:CoilProteinID:EAZ45658.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856
GO:GO:0005874GO:GO:0008017InterPro:IPR011989EnsemblPlantsGene:Os09g0560000EnsemblPlants:Os09t0560000-01PANTHER:PTHR31355
PANTHER:PTHR31355:SF5UniProt:Q653R0SMART:SM01349SUPFAM:SSF48371InterPro:TOGInterPro:TORTIFOLIA1/SPIRAL2-like
UniParc:UPI000043A466RefSeq:XP_015651441.1RefSeq:XP_015651442.1SEG:seg::
Description
Armadillo-like helical domain containing protein. (Os09t0560000-01)
Coordinates
chr9:-:22248966..22254215
Molecular Weight (calculated)
91265.9 Da
IEP (calculated)
8.260
GRAVY (calculated)
-0.356
Length
833 amino acids
Sequence
(BLAST)
001: MKSNAVTSKG KAVFELKHRL VQAINKIADR DTYQIGLDEL EKAADTLPPD MVGPFLSCVV DTDAEQKSAV RKECIKVIGT LARSHGSLVA PHMTKMVTSI
101: VKRLKDADSV VRDACVDTCG TLALCARGYG DGGAALVALV RPLFESLGEQ NRYVQAGAAS CLAKVIDESN YFPGPVLPQM LVRVVKLLKN PHFMAKPAVI
201: ELIRSIIQAE GASTEQSLTS ALTSIMDALK SSDWTTRKAA SIALSSIALS SGYLVASFRT SCLRSLERSK FDKVKPVRDA ITQAIQLWKV IPGSDTPEPS
301: EAGSSTKENF FGDHHDGRSI NDGGSRDTSF RRVDPASSVS AISGNSITSS KKRSPLSINK IALNNAANQQ RSKLSDWHVE ISVPKQNMIP LVDFEEKVSG
401: NGSMLKGSNR SPYEIVDNDS KYEYDPMDDK QDCSSMSEVA SRSCETKHVT SAQECVEDCD SARDIEQFPR AQKSKSIDST VTDITSHGTH TCCLGAMKEL
501: SHIRKQLQEM ERKQANIFDM LQEFMSNSVE NMSVLSMKVH NLENAVDKTV YTITQSESRY HLPGSKFIKN QSATSSPRVS TSTPRSSVDA NYKPPPIPHL
601: KQEKKWMQDQ PSKGLNMGVK EGEFLKSHTH DKTRKPGVVR SESALGRYVP SSARTRASGV KGNFPVSLTN SCEQPELQNA LRASKEFDGN DDMASAYVEA
701: LNSGDCDYLI DVMDRTGPVL EKLSRETTSE LLRVIAGQFL NKKMFDLALP WLQQVADLSM IYKPSQLFVS VRAQKEFLAL LEEAATSGST EPAIRIAIAQ
801: LAFKLTKVCE VAPCRKVLSR VCRGNETIMA TAM
Best Arabidopsis Sequence Match ( AT2G07170.1 )
(BLAST)
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.