Factsheet for Os06t0244700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044760_P001	Maize	cytosol	70.45	61.28
Zm00001d037271_P001	Maize	cytosol	70.64	60.75
TraesCS7A01G236800.1	Wheat	cytosol	70.27	59.17
KXG19701	Sorghum	cytosol	68.18	58.16
HORVU7Hr1G040280.1	Barley	peroxisome	67.61	57.58
Os02t0739900-01	Rice	cytosol, mitochondrion	63.07	54.41
TraesCS7D01G199100.1	Wheat	plastid	69.89	52.27
TraesCS7B01G103000.1	Wheat	plastid	69.51	51.98
CDX68449	Canola	cytosol	7.2	51.35
GSMUA_Achr7P02250_001	Banana	cytosol	37.5	35.68
KRH57001	Soybean	cytosol	37.12	32.08
KRH03379	Soybean	cytosol, mitochondrion	36.74	31.8
VIT_17s0000g07470.t01	Wine grape	cytosol	36.93	30.56
Bra007853.1-P	Field mustard	nucleus	11.93	29.58
KRH54469	Soybean	cytosol	34.09	28.89
Bra035889.1-P	Field mustard	cytosol	30.49	28.65
KRH63453	Soybean	cytosol	33.71	28.62
CDY16768	Canola	cytosol	29.55	28.36
VIT_01s0026g01020.t01	Wine grape	cytosol	34.09	27.91
PGSC0003DMT400063183	Potato	cytosol	32.77	27.86
Solyc03g113680.2.1	Tomato	nucleus	32.2	27.16
CDY33611	Canola	cytosol, nucleus, plastid	23.48	27.13
AT1G59850.1	Thale cress	plastid	25.38	26.91
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	22.92	26.36
AT5G62580.1	Thale cress	cytosol	30.68	26.34
CDY24496	Canola	plastid	23.11	26.29
AT1G27210.1	Thale cress	plastid	30.87	26.08
CDY62371	Canola	plastid	25.38	25.87
CDY56641	Canola	cytosol	28.03	25.65
CDY46411	Canola	plastid	29.36	25.58
Bra016316.1-P	Field mustard	plastid	29.36	25.58
CDX87253	Canola	cytosol	28.6	25.46
CDY00306	Canola	cytosol	27.84	25.3
Bra010100.1-P	Field mustard	cytosol	27.65	25.17
Bra024646.1-P	Field mustard	plastid	29.92	24.76
CDY16232	Canola	plastid	29.55	24.76
KRH69431	Soybean	endoplasmic reticulum, nucleus	30.49	24.51
KRH74717	Soybean	plastid	30.3	23.99
PGSC0003DMT400058293	Potato	extracellular	27.65	22.74
Solyc05g006550.2.1	Tomato	cytosol	28.6	22.74
CDY14680	Canola	cytosol, plastid	29.36	21.89
Os07t0520400-01	Rice	cytosol, mitochondrion, nucleus, plastid	22.73	13.41
Os09t0560000-01	Rice	cytosol	19.7	12.48

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A0P0WUJ7	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:BAS97019.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0006508	GO:GO:0008017
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR011989
EnsemblPlantsGene:Os06g0244700	EnsemblPlants:Os06t0244700-01	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	SUPFAM:SSF48371	InterPro:TORTIFOLIA1/SPIRAL2-like
UniParc:UPI000393BBBF	SEG:seg	:	:	:	:

Description

Similar to microtubule-associated protein TORTIFOLIA1. (Os06t0244700-01)

Coordinates

chr6:+:7530825..7534853

Molecular Weight (calculated)

57952.3 Da

IEP (calculated)

9.104

GRAVY (calculated)

-0.624

Length

528 amino acids

Sequence
(BLAST)

001: MGPAPKAEPM KQRVNRCLLR LSDRDTEAMA AAELDGIARG LEADELPAFL AAVSDARPTD RTPLRRHSLR LLALLAAYLQ ALLPRLLKLL RSSAFKAKPA
101: LISLIGAASA ASGGGAAATA VPSLRDALTG EDWAARKAAA EALALLALEH GDNLVEQKPS CIAVFEAKRF DKVKIVRESM NRMIEAWKEI PDMDEEVCSS
201: DVPPSPQSQT RSSSTDSASD GRYPADSLGS NSVQSVRRRN LSPTKKSPPR EALHNVSNRR TSSSSIGNKK NSPPSRHNSG QAKNFECKVN VTDAPDATPI
301: KTVTEEKLLK DGNVRARLEA RRVLFQKNGE ERYNKVPGLK SGSRVVPYNG DDDSEEIAES EDVHEEFQSG HKEEDLSKIR MQLVQIENQQ TSLLNLLQKF
401: MGSSQNGIRS LETRVNGLEM ALDEISRDLA ASSGRMPSSE PDMNCCILSP KFWRRHDGSR YSSKYSISDI ANYSEESRTS YKWERQKFGV QGVVTNPLAE
501: PNASFAGNTV VAQEARRQNS AQYKSRMG

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.