Factsheet for Zm00001d044760_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037271_P001	Maize	cytosol	84.18	83.22
KXG19701	Sorghum	cytosol	84.68	83.04
Os06t0244700-01	Rice	cytosol	61.28	70.45
TraesCS7A01G236800.1	Wheat	cytosol	70.51	68.26
HORVU7Hr1G040280.1	Barley	peroxisome	68.04	66.61
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	63.26	62.75
TraesCS7D01G199100.1	Wheat	plastid	70.68	60.76
TraesCS7B01G103000.1	Wheat	plastid	70.35	60.48
Zm00001d016462_P001	Maize	cytosol	34.76	49.76
CDX68449	Canola	cytosol	5.93	48.65
GSMUA_Achr7P02250_001	Banana	cytosol	38.06	41.62
Zm00001d044701_P001	Maize	cytosol	32.13	40.04
KRH57001	Soybean	cytosol	35.91	35.68
KRH03379	Soybean	cytosol, mitochondrion	35.75	35.57
KRH63453	Soybean	cytosol	34.76	33.92
VIT_17s0000g07470.t01	Wine grape	cytosol	34.93	33.23
KRH54469	Soybean	cytosol	34.1	33.23
AT1G59850.1	Thale cress	plastid	27.02	32.93
CDY16768	Canola	cytosol	29.82	32.91
Bra035889.1-P	Field mustard	cytosol	30.15	32.56
Zm00001d017306_P002	Maize	cytosol	16.8	32.38
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	24.22	32.03
CDY24496	Canola	plastid	24.38	31.9
CDY33611	Canola	cytosol, nucleus, plastid	23.89	31.73
PGSC0003DMT400063183	Potato	cytosol	32.45	31.72
VIT_01s0026g01020.t01	Wine grape	cytosol	33.28	31.32
Solyc03g113680.2.1	Tomato	nucleus	31.96	30.99
CDY62371	Canola	plastid	25.86	30.31
CDX87253	Canola	cytosol	29.16	29.85
CDY56641	Canola	cytosol	28.17	29.64
Bra007853.1-P	Field mustard	nucleus	10.38	29.58
CDY00306	Canola	cytosol	28.17	29.43
KRH69431	Soybean	endoplasmic reticulum, nucleus	31.8	29.38
Bra010100.1-P	Field mustard	cytosol	28.01	29.31
AT1G27210.1	Thale cress	plastid	30.15	29.28
AT5G62580.1	Thale cress	cytosol	29.65	29.27
CDY46411	Canola	plastid	28.83	28.88
Bra016316.1-P	Field mustard	plastid	28.83	28.88
KRH74717	Soybean	plastid	31.63	28.79
CDY16232	Canola	plastid	29.65	28.57
Bra024646.1-P	Field mustard	plastid	29.82	28.37
Zm00001d018800_P001	Maize	extracellular, mitochondrion	7.25	27.85
PGSC0003DMT400058293	Potato	extracellular	28.34	26.79
CDY14680	Canola	cytosol, plastid	30.15	25.85
Solyc05g006550.2.1	Tomato	cytosol	27.68	25.3
Zm00001d013733_P002	Maize	mitochondrion	9.23	19.38
Zm00001d021641_P002	Maize	plastid	22.41	14.67
Zm00001d006504_P005	Maize	plastid	21.91	14.32
Zm00001d021378_P007	Maize	cytosol	19.93	14.27

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A1D6NRB7	ProteinID:AQL00845.1	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:IPR011989	PANTHER:PTHR31355
PANTHER:PTHR31355:SF16	SUPFAM:SSF48371	InterPro:TORTIFOLIA1/SPIRAL2-like	UniParc:UPI000842FCBE	EnsemblPlantsGene:Zm00001d044760	EnsemblPlants:Zm00001d044760_P001
EnsemblPlants:Zm00001d044760_T001	SEG:seg	:	:	:	:

Description

ARM repeat superfamily protein

Coordinates

chr9:-:1601296..1605346

Molecular Weight (calculated)

65771.6 Da

IEP (calculated)

8.642

GRAVY (calculated)

-0.434

Length

607 amino acids

Sequence
(BLAST)

001: MGPAPREPMK QRVSRCLLRL SDRDTEAMAA AELDAIAREL DADELPVFVA AVSDARPTDR TPLRRHSLRL LALVAGEHPR AAVAPLVPRL LAAALRRVRD
101: PDSSVRAALV DAARAAAGAA ASPPAALAPL ADALLHEQDQ CAQLAAALAA AAAVEASEPT DDLVAYLRGL LPRLYRLLRS TAFRAKPALI SLIGTASAAS
201: GGGAASTAVP CLRDALTGDD WAARKAAAEA LALLALQHGG DLVSHKSSCI TVFEAKRFDK VKIVRESMNR MIEAWREIPD LDEEVCSFDV PPSSQSTSSL
301: TDTADSLGST STPSITRRNS WPTNRQPPPD ASHNVTNRKG STPSIIGKKI LPPSRRSTNQ AKKFEGRVDV TVASDATPAK MVTEEKLLNE GSVRERLEAR
401: RVLFQKTGEK GYKKLAGPKS GSRVFPYSGD GDFEETAETE DAPDELQSAH KDEALWKIRL QLVQIENQHA SLLNLLQKFM GSSQNGIRSL ETRVNGLEMV
501: LDEISRDLAA SSGRTPNSEP DTIACCILSP KFWRRHDGGR YTSRYSVSDA PDYSEERKSS YKWDRHKFGV HGGSVTNPLA EPNDSSARSI AVSQEGRRRD
601: SIQYRSR

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.