CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63453	Soybean	cytosol	84.27	84.41
KRH57001	Soybean	cytosol	59.23	60.39
KRH03379	Soybean	cytosol, mitochondrion	57.78	59.02
VIT_17s0000g07470.t01	Wine grape	cytosol	55.38	54.08
Bra035889.1-P	Field mustard	cytosol	40.93	45.37
Solyc03g113680.2.1	Tomato	nucleus	45.59	45.37
PGSC0003DMT400063183	Potato	cytosol	44.78	44.93
CDY16768	Canola	cytosol	39.33	44.55
CDY00306	Canola	cytosol	41.25	44.23
CDY56641	Canola	cytosol	40.77	44.02
Bra010100.1-P	Field mustard	cytosol	40.29	43.28
KRH69431	Soybean	endoplasmic reticulum, nucleus	44.94	42.62
KRH74717	Soybean	plastid	45.59	42.58
AT5G62580.1	Thale cress	cytosol	40.93	41.46
CDX87253	Canola	cytosol	39.17	41.15
GSMUA_Achr7P02250_001	Banana	cytosol	32.58	36.58
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	35.63	36.27
EES05553	Sorghum	cytosol	35.79	36.2
Os02t0739900-01	Rice	cytosol, mitochondrion	35.47	36.11
KXG19701	Sorghum	cytosol	34.19	34.41
Zm00001d037271_P001	Maize	cytosol	33.87	34.36
TraesCS6B01G341700.1	Wheat	mitochondrion	34.19	34.35
TraesCS6D01G290800.1	Wheat	mitochondrion	34.19	34.3
Zm00001d044760_P001	Maize	cytosol	33.23	34.1
Os06t0244700-01	Rice	cytosol	28.89	34.09
HORVU7Hr1G040280.1	Barley	peroxisome	33.87	34.03
TraesCS7A01G236800.1	Wheat	cytosol	34.19	33.97
TraesCS6A01G311500.1	Wheat	cytosol	32.1	33.96
TraesCS7D01G199100.1	Wheat	plastid	34.19	30.17
TraesCS7B01G103000.1	Wheat	plastid	33.87	29.89
Zm00001d016462_P001	Maize	cytosol	19.1	28.07
HORVU6Hr1G076760.1	Barley	nucleus	27.45	27.76
Zm00001d017306_P002	Maize	cytosol	13.0	25.71
Zm00001d044701_P001	Maize	cytosol	19.58	25.05
KRG98830	Soybean	plastid	27.93	18.85
KRH46114	Soybean	plastid	27.61	18.57
KRH74132	Soybean	cytosol, endoplasmic reticulum, nucleus	22.47	17.39

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100776414	MapMan:35.1	EMBL:ACUP02003529	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	EnsemblPlantsGene:GLYMA_06G187500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:HEAT
UniProt:I1KCM0	InterPro:IPR011989	EnsemblPlants:KRH54469	ProteinID:KRH54469	ProteinID:KRH54469.1	ProteinID:KRH54470.1
PFAM:PF02985	PFAM:PF13513	PANTHER:PTHR31355	PANTHER:PTHR31355:SF8	SMART:SM01349	SUPFAM:SSF48371
InterPro:TOG	InterPro:TORTIFOLIA1/SPIRAL2-like	UniParc:UPI000233944B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:16354435..16359242

Molecular Weight (calculated)

68205.1 Da

IEP (calculated)

9.525

GRAVY (calculated)

-0.479

Length

623 amino acids

Sequence
(BLAST)

001: MPHAKTSQSQ QNIKQRVLTC LTKLSDRDTQ AAGATELESI ARTIDPHSVP VFLSCIHSTD SSDKTPVRKQ CVHLVATLSH AHGDALSPFL SKIIACLVRR
101: LRDPDSSVRA ACADSVGALS ACVTRQPFAA AFLKPLAEAL FTEQDPSSQA GAALCLASAV EAAPDPDPAR LARLLPRLER LIKSKVFRAK PALLVLVGSV
201: VEARGASSGV ALKNLVPCLV EALGSEDWAT RKGAAEALKK LASVEKDLLP EFKGGCLKVF ENRRFDKVKL VREVMNEMLE AWKQIPDVSD EFSPPPQSQL
301: SSKENASDGR YPPVSQNSCS PGSVMSKLRK KSSQVSKSTP PDTSAVRNAK RSALSGDRMS SGVLQKLNHN HWDVRIAVSN VSDCGERQQK DEDVLERRKK
401: DRSRFFKPET KRALFDKNSD DKMHKFGGSK AGSRVVPCSE ESQDSDPVCN VTKDLHRNDK ESEELSLIRA QLVQIEKQQS SLLDLVQKFM GSSENGMRTL
501: ETRVHGLELA LDEISYDLAV SSGRITKFDA PKHTCCMLPG AEFLSSKFWK KTQGRYSSYR FSRTGSTPLL PSSHYRANRN AESNRSTSHR LGVHGDGGFT
601: TNPLAEIKIN SREISGSARS ELA

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.