Factsheet for Solyc03g113680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063183	Potato	cytosol	91.37	92.11
VIT_17s0000g07470.t01	Wine grape	cytosol	51.92	50.94
KRH57001	Soybean	cytosol	46.33	47.46
KRH03379	Soybean	cytosol, mitochondrion	45.69	46.89
KRH63453	Soybean	cytosol	45.53	45.82
KRH54469	Soybean	cytosol	45.37	45.59
CDY56641	Canola	cytosol	39.62	42.98
Bra035889.1-P	Field mustard	cytosol	38.5	42.88
Bra010100.1-P	Field mustard	cytosol	39.46	42.59
CDY00306	Canola	cytosol	39.46	42.51
CDY16768	Canola	cytosol	36.74	41.82
CDX87253	Canola	cytosol	38.34	40.47
AT5G62580.1	Thale cress	cytosol	38.34	39.02
GSMUA_Achr7P02250_001	Banana	cytosol	31.31	35.32
Solyc05g006550.2.1	Tomato	cytosol	36.58	34.49
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	33.55	34.31
EES05553	Sorghum	cytosol	33.71	34.25
Os02t0739900-01	Rice	cytosol, mitochondrion	33.39	34.15
KXG19701	Sorghum	cytosol	32.75	33.12
TraesCS6B01G341700.1	Wheat	mitochondrion	32.59	32.9
Zm00001d037271_P001	Maize	cytosol	32.11	32.74
TraesCS6A01G311500.1	Wheat	cytosol	30.67	32.6
TraesCS7A01G236800.1	Wheat	cytosol	32.59	32.54
TraesCS6D01G290800.1	Wheat	mitochondrion	32.27	32.53
HORVU7Hr1G040280.1	Barley	peroxisome	32.11	32.42
Os06t0244700-01	Rice	cytosol	27.16	32.2
Zm00001d044760_P001	Maize	cytosol	30.99	31.96
TraesCS7D01G199100.1	Wheat	plastid	33.39	29.6
TraesCS7B01G103000.1	Wheat	plastid	32.59	28.9
Zm00001d016462_P001	Maize	cytosol	18.53	27.36
HORVU6Hr1G076760.1	Barley	nucleus	25.4	25.81
Zm00001d017306_P002	Maize	cytosol	11.82	23.49
Zm00001d044701_P001	Maize	cytosol	17.41	22.38
Solyc07g042580.2.1	Tomato	cytosol	24.6	18.49
Solyc10g006350.2.1	Tomato	plastid	24.12	17.48

Protein Annotations

EnsemblPlants:Solyc03g113680.2.1	EnsemblPlantsGene:Solyc03g113680.2	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:TORTIFOLIA1/SPIRAL2-like	PANTHER:PTHR31355	PANTHER:PTHR31355:SF8
SEG:seg	SUPFAM:SSF48371	UniParc:UPI0002767DFE	UniProt:K4BKM0	MapMan:35.1	:

Description

No Description!

Coordinates

chr3:-:63744810..63748829

Molecular Weight (calculated)

68047.8 Da

IEP (calculated)

9.311

GRAVY (calculated)

-0.376

Length

626 amino acids

Sequence
(BLAST)

001: MSVYSKQNQN QTRDMKHRVL TCLHKLSDRD THSAAASELE SIAKTLSPEA IPPFVSSIAA TDSSDKSPVR KQCLRLISLL SEHHGDSLSP HLSKLLTAVV
101: RRLRDPDSSV RNACVTACAS ISSHLTKPPF YSIIKPFLEA LFTEQEMNSQ IGAALCLSAA IEASPDPDIA CLRKSLPRFE KLLKSDSFKA KAALLTMIGS
201: VIAVRAASTQ QIVRNLVPYL VEFVGSDDWA ARKASAEALL RLVAVEGDAL SEFKAPYLKT FEAKRFDKVK AVRETMNQML EAWKGIPDLS DDGSPLPLSN
301: SSSKENASDG RYPPGLKTSR AVSSSVPSVK RLSNKSSVAD NSTASAAQKG PAIFRKLDRK KPWKVEVSAP HGSSVDYQQN NDGIQLGKDK DLEAHTKPGV
401: KRTLFSKITN ETRNSVVKAG SRVVPYQDEI SESTEVVSNE TEDLCGNPKS CEDLSLIRKQ LAQIETQQSN LLDLLQKFMG SSQSGMQSLE TRVHGLELAL
501: DEISFDLAMS TGSMSNTNSA SVCCKLPGAE FLTSKLWKRT IGRGATAHFS ASGGTSSAGL ISSVADQNGD GERLKVENRR YRLHSSRGFI VNPLAEIHSD
601: PQRISEPSVG GVSKSPQNGV WRLHRL

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.