CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044760_P001	Maize	cytosol	83.04	84.68
Zm00001d037271_P001	Maize	cytosol	82.71	83.39
Os06t0244700-01	Rice	cytosol	58.16	68.18
TraesCS7A01G236800.1	Wheat	cytosol	68.5	67.62
HORVU7Hr1G040280.1	Barley	peroxisome	65.75	65.65
EES05553	Sorghum	cytosol	63.81	64.12
TraesCS7D01G199100.1	Wheat	plastid	68.66	60.2
TraesCS7B01G103000.1	Wheat	plastid	68.01	59.63
CDX68449	Canola	cytosol	5.82	48.65
GSMUA_Achr7P02250_001	Banana	cytosol	36.19	40.36
KRH03379	Soybean	cytosol, mitochondrion	36.35	36.89
KRH57001	Soybean	cytosol	35.86	36.33
VIT_17s0000g07470.t01	Wine grape	cytosol	36.03	34.95
KRH54469	Soybean	cytosol	34.41	34.19
AT1G59850.1	Thale cress	plastid	27.46	34.14
CDY33611	Canola	cytosol, nucleus, plastid	25.2	34.14
KRH63453	Soybean	cytosol	34.09	33.92
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	24.88	33.55
CDY24496	Canola	plastid	25.04	33.41
PGSC0003DMT400063183	Potato	cytosol	33.28	33.17
VIT_01s0026g01020.t01	Wine grape	cytosol	34.41	33.02
Solyc03g113680.2.1	Tomato	nucleus	33.12	32.75
Bra035889.1-P	Field mustard	cytosol	29.73	32.74
CDY16768	Canola	cytosol	29.08	32.73
Bra007853.1-P	Field mustard	nucleus	10.66	30.99
CDY56641	Canola	cytosol	28.11	30.16
KRH69431	Soybean	endoplasmic reticulum, nucleus	31.99	30.14
KRH74717	Soybean	plastid	32.31	29.98
CDY00306	Canola	cytosol	28.11	29.95
CDY62371	Canola	plastid	25.04	29.92
AT5G62580.1	Thale cress	cytosol	29.73	29.92
CDX87253	Canola	cytosol	28.59	29.85
AT1G27210.1	Thale cress	plastid	29.73	29.44
Bra010100.1-P	Field mustard	cytosol	27.46	29.31
CDY16232	Canola	plastid	29.4	28.89
Bra016316.1-P	Field mustard	plastid	28.11	28.71
CDY46411	Canola	plastid	28.11	28.71
Bra024646.1-P	Field mustard	plastid	29.4	28.53
PGSC0003DMT400058293	Potato	extracellular	28.59	27.57
Solyc05g006550.2.1	Tomato	cytosol	28.27	26.36
CDY14680	Canola	cytosol, plastid	29.89	26.13
EER99458	Sorghum	plastid	22.94	15.4
EER99353	Sorghum	cytosol	20.36	15.05

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A194YJB8	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:IPR011989	EnsemblPlants:KXG19701	ProteinID:KXG19701
ProteinID:KXG19701.1	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	EnsemblPlantsGene:SORBI_3010G100700	SUPFAM:SSF48371	InterPro:TORTIFOLIA1/SPIRAL2-like
UniParc:UPI0007F30D78	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:9279801..9286040

Molecular Weight (calculated)

66946.8 Da

IEP (calculated)

7.816

GRAVY (calculated)

-0.481

Length

619 amino acids

Sequence
(BLAST)

001: MGPAPREPMK QRVNRCLLRL SDRDTEAMAA AELDAIAREL DADELPVFVA AVSDARPTDR TPLRRHSLRL LALVAGEHPR GAVAPLVPRL LAAALRRVRD
101: PDSSVRAALV DAARAAAGAA ASPPAALAPL ADALLHEQDQ CAQLAAALAA AAAVEASEPT DDLAAYLRAL LPRLYKLLRS AAFKAKPALI SLIGTASAAS
201: GGGAASAAVP CLRDALAGDD WAARKAAAEA LALLALEHGD DLASHKSSCI TVFEAKRFDK VKIVRESMNR MIEAWKEIPD LDEDVSSFDA PPSSQSKSSL
301: TETASDGRYP ADSLGSTSTT PSITRRNSWP TNRQPQPDAS HNAINRKGSP PSIVSKKNLP PSRRNTDQSK KFEDRVEVTV APDATPIKMV TEEKLLKEGS
401: SVRERLEARR VLFQKTGEKG YKKLAGPKSG SRVVPYSGDG DLEEETAETE DAPEEFQSAH KDEDLSKIRM QLVQIENQQA SLLNLLQKFM GSSQNGIRSL
501: ETRVNGLEMV LDEISRDLAA CSGRIPNSEP DTNACCILSP KFWRRHDGSR YSSRYSASDA PNYSEESKSS YKWDRQKFGV HGGFVTNPLA EANDSSVRSI
601: AVAQEGRRRD SAQYRSRLS

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.