Factsheet for Bra035420.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24496	Canola	plastid	99.56	98.49
Bra007853.1-P	Field mustard	nucleus	42.92	92.49
AT1G59850.1	Thale cress	plastid	69.72	64.26
Bra016316.1-P	Field mustard	plastid	49.02	37.13
Bra024646.1-P	Field mustard	plastid	50.11	36.05
VIT_01s0026g01020.t01	Wine grape	cytosol	45.75	32.56
KRH69431	Soybean	endoplasmic reticulum, nucleus	43.36	30.29
Bra035889.1-P	Field mustard	cytosol	37.04	30.25
KRH74717	Soybean	plastid	43.36	29.84
PGSC0003DMT400058293	Potato	extracellular	41.39	29.59
Bra010100.1-P	Field mustard	cytosol	35.95	28.45
Solyc05g006550.2.1	Tomato	cytosol	40.52	28.01
EES05553	Sorghum	cytosol	34.42	25.65
TraesCS6B01G341700.1	Wheat	mitochondrion	34.42	25.48
TraesCS6D01G290800.1	Wheat	mitochondrion	34.42	25.44
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	33.77	25.33
Os02t0739900-01	Rice	cytosol, mitochondrion	33.33	25.0
Zm00001d037271_P001	Maize	cytosol	33.33	24.92
TraesCS7A01G236800.1	Wheat	cytosol	33.99	24.88
KXG19701	Sorghum	cytosol	33.55	24.88
HORVU7Hr1G040280.1	Barley	peroxisome	33.55	24.84
TraesCS6A01G311500.1	Wheat	cytosol	31.37	24.45
Zm00001d044760_P001	Maize	cytosol	32.03	24.22
GSMUA_Achr7P02250_001	Banana	cytosol	27.89	23.06
Os06t0244700-01	Rice	cytosol	26.36	22.92
Zm00001d016462_P001	Maize	cytosol	21.13	22.88
TraesCS7B01G103000.1	Wheat	plastid	34.42	22.38
TraesCS7D01G199100.1	Wheat	plastid	34.2	22.24
Zm00001d017306_P002	Maize	cytosol	13.94	20.32
Zm00001d044701_P001	Maize	cytosol	20.48	19.3
HORVU6Hr1G076760.1	Barley	nucleus	25.05	18.67
Bra030470.1-P	Field mustard	cytosol	27.89	16.56
Bra026382.1-P	Field mustard	plastid	29.41	13.69

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra035420	EnsemblPlants:Bra035420.1
EnsemblPlants:Bra035420.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:IPR011989
UniProt:M4F2X0	PANTHER:PTHR31355	PANTHER:PTHR31355:SF3	SUPFAM:SSF48371	InterPro:TORTIFOLIA1/SPIRAL2-like	UniParc:UPI0002544AA8
SEG:seg	:	:	:	:	:

Description

AT1G59850 (E=1e-113) | binding

Coordinates

chrA01:-:16437169..16438548

Molecular Weight (calculated)

49953.5 Da

IEP (calculated)

8.222

GRAVY (calculated)

-0.369

Length

459 amino acids

Sequence
(BLAST)

001: MRSSPSVSPP RTVTDLKQRV IACLNRLSDR DTQSLAAAEL DSIALNLSPE AFSLFINCLQ TTDSSAKSPV RKHCVSLLSL LSRSHGDSLA PHLPKMVSTV
101: LRRLRDPDTS VRAACATASV DMTTNITEPP FSVLAGPMIE ALIHDCDANA QIGAAVCLAA AIDAADDPDV EQLQKALPKI GKLLKSEGFK AKPELLGAIG
201: SVIGAIGGRN SDKAVLDWLL PNVLEFLSSD DWHARKAAAE AVARVATAEE ELAPLYKKAC LGVLESRRFD KVKLVRERMN HTLSLWKQLG DDSPDSSSLS
301: KSGKGINTLK SKEKNPNVPT GSKLNDVEDE LRPLGTKRVL FPAKPSKVKE NRSNKSQAVA VVQSGDEEEE SSSSSSSQRK NAEEELSLIR NQITQIEKQQ
401: SSLLDLFQRF MESSQNEMQS LGRRVRCLET SFSVLSTDLL VSRTITQNGN HKRNAHLQN

Best Arabidopsis Sequence Match ( AT1G59850.1 )
(BLAST)

001: MPSVQIRSSP SHSQPAMTVT DLKQRVIACL NRLSDRDTLA LAAAELDSIA LNLSPETFSL FINCLQSTDS SAKSPVRKHC VSLLSVLSRS HGDSLAPHLS
101: KMVSTVLRRL RDPDSSVRAA CVAASVDMTT NITGQPFSIL FGPMIETVIH DCDPNAQISA AMCLAAAVDA ADEPDVEQLQ KALPKIGKLL KSEGFKAKAE
201: LLGAIGTVIG AVGGRNSEKA VLDWLLPNVS EFLSSDDWRA RKAAAEAMAR VAMVEEELAP LYKKTCLGIL ESRRFDKVKL VRETMNRTLG LWKQLEGDST
301: EVSESSSSSK SASSGLSATS GKRSNTLKGK DRNLNTPLSS KSNDVEPLDR GDTPKDVEQE AVVSKEKRNR STLGAKRVLF PAKMHKVKEN GSNKSQVVQS
401: SDEESPKTDS GSSSSSQAKS NAEELSLIRH QITQIEKQQS SLLDLFQKFM ESSHNGMQSL ERRVRGLETS FSVISTDLLV SRSITQNGNH KRNACRQN

Arabidopsis Description

TOR1L5TORTIFOLIA1-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.