Factsheet for TraesCS6A01G311500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G290800.1	Wheat	mitochondrion	98.47	93.4
TraesCS6B01G341700.1	Wheat	mitochondrion	97.96	93.06
EES05553	Sorghum	cytosol	82.34	78.73
Os02t0739900-01	Rice	cytosol, mitochondrion	79.46	76.47
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	78.78	75.82
HORVU6Hr1G076760.1	Barley	nucleus	76.91	73.54
Zm00001d016462_P001	Maize	cytosol	46.01	63.92
TraesCS7A01G236800.1	Wheat	cytosol	64.69	60.77
Zm00001d044701_P001	Maize	cytosol	41.6	50.31
CDX68449	Canola	cytosol	6.28	50.0
GSMUA_Achr7P02250_001	Banana	cytosol	39.39	41.8
Zm00001d017306_P002	Maize	cytosol	20.71	38.73
KRH03379	Soybean	cytosol, mitochondrion	36.5	35.25
KRH57001	Soybean	cytosol	36.33	35.02
Bra007853.1-P	Field mustard	nucleus	12.22	33.8
KRH63453	Soybean	cytosol	34.97	33.12
VIT_17s0000g07470.t01	Wine grape	cytosol	34.97	32.29
KRH54469	Soybean	cytosol	33.96	32.1
PGSC0003DMT400063183	Potato	cytosol	33.45	31.72
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	24.45	31.37
Bra035889.1-P	Field mustard	cytosol	29.88	31.32
CDY24496	Canola	plastid	24.62	31.25
AT1G59850.1	Thale cress	plastid	26.32	31.12
CDY16768	Canola	cytosol	28.86	30.91
Solyc03g113680.2.1	Tomato	nucleus	32.6	30.67
CDY33611	Canola	cytosol, nucleus, plastid	23.6	30.42
VIT_01s0026g01020.t01	Wine grape	cytosol	32.77	29.92
CDY00306	Canola	cytosol	29.2	29.6
CDY56641	Canola	cytosol	28.69	29.29
Bra010100.1-P	Field mustard	cytosol	28.69	29.14
CDY62371	Canola	plastid	25.13	28.57
KRH74717	Soybean	plastid	32.26	28.49
AT5G62580.1	Thale cress	cytosol	29.71	28.46
KRH69431	Soybean	endoplasmic reticulum, nucleus	31.58	28.31
CDX87253	Canola	cytosol	28.35	28.16
CDY46411	Canola	plastid	28.52	27.72
Bra016316.1-P	Field mustard	plastid	28.35	27.56
AT1G27210.1	Thale cress	plastid	28.69	27.04
CDY16232	Canola	plastid	28.18	26.35
Bra024646.1-P	Field mustard	plastid	28.52	26.33
PGSC0003DMT400058293	Potato	extracellular	27.16	24.92
Solyc05g006550.2.1	Tomato	cytosol	26.99	23.95
CDY14680	Canola	cytosol, plastid	28.69	23.87
TraesCS5A01G363500.1	Wheat	cytosol	22.07	15.68
TraesCS2A01G221200.6	Wheat	plastid	21.39	14.24

Protein Annotations

EnsemblPlants:TraesCS6A01G311500.1	EnsemblPlantsGene:TraesCS6A01G311500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:ARM-type_fold
InterPro:TORTIFOLIA1/SPIRAL2-like	ncoils:Coil	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	SEG:seg	SUPFAM:SSF48371
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:547809906..547813286

Molecular Weight (calculated)

63094.0 Da

IEP (calculated)

9.779

GRAVY (calculated)

-0.334

Length

589 amino acids

Sequence
(BLAST)

001: MAAAELDAVA RALAADELAA FVSAVSDARP TDKTPLRRHS LRLLALVAAS HPREAVAPLV PRILAAALRR VRDQDSSVRG ALVDAARAAA AASASASAAL
101: GPLADALLHE QDQCAQLAAA LATVAAVEAS PLTADLASYL HKLQPRLLKL LRSNAFKAKP ALIALIGASA AVAGDAEVTA SIPCLREAIA SDDWAARKAA
201: AEALAAFALE YKDLLMTYKS SCLAYFEARR FDKVKIVRDS MSRMIEAWKE IPDIEEEELS SCTAPASLSQ RRSSLAGSVS DGRYPAASLG SNSVQSATRK
301: NRLPTSRSPP PDVSPGVTKK HSPSSIRNKR LSPPSNRKVG QAKNCDYKVD TAIAPDATPI KEVTEEKLLK GGNLRSRLET RRTLFQGNEE RATKLAGAKA
401: GSRVVPYECG GNMEEISEVE GGSERSQSGL KDEGLSEIRS QLLQIEKQQT GLLDLLQKFM GKSENGMNSL ETRVHGLEMA LDEISRDLAV SSERMSSSEP
501: RVNTCCILSP KFWRRHDGGR NSSRFSASSV PNSSEGSRAS YKWERQKFGV QGGFVTNPLA EPNISSVGRT AVTQEGRRKD LALQKSRVG

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.