Factsheet for TraesCS6D01G290800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G311500.1	Wheat	cytosol	93.4	98.47
TraesCS6B01G341700.1	Wheat	mitochondrion	97.75	97.9
EES05553	Sorghum	cytosol	80.84	81.49
Os02t0739900-01	Rice	cytosol, mitochondrion	78.58	79.74
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	77.78	78.92
HORVU6Hr1G076760.1	Barley	nucleus	73.11	73.7
Zm00001d016462_P001	Maize	cytosol	43.64	63.92
TraesCS7D01G199100.1	Wheat	plastid	63.28	55.67
CDX68449	Canola	cytosol	5.96	50.0
Zm00001d044701_P001	Maize	cytosol	38.97	49.69
GSMUA_Achr7P02250_001	Banana	cytosol	39.77	44.5
Zm00001d017306_P002	Maize	cytosol	19.65	38.73
KRH03379	Soybean	cytosol, mitochondrion	36.88	37.54
KRH57001	Soybean	cytosol	36.72	37.32
KRH63453	Soybean	cytosol	35.27	35.21
VIT_17s0000g07470.t01	Wine grape	cytosol	35.43	34.48
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	25.44	34.42
CDY24496	Canola	plastid	25.6	34.27
KRH54469	Soybean	cytosol	34.3	34.19
Bra007853.1-P	Field mustard	nucleus	11.59	33.8
AT1G59850.1	Thale cress	plastid	27.05	33.73
CDY33611	Canola	cytosol, nucleus, plastid	24.8	33.7
PGSC0003DMT400063183	Potato	cytosol	33.33	33.33
Bra035889.1-P	Field mustard	cytosol	29.79	32.92
CDY16768	Canola	cytosol	28.82	32.55
Solyc03g113680.2.1	Tomato	nucleus	32.53	32.27
VIT_01s0026g01020.t01	Wine grape	cytosol	33.33	32.09
CDY62371	Canola	plastid	26.09	31.27
CDY00306	Canola	cytosol	28.99	30.98
CDY56641	Canola	cytosol	28.5	30.68
KRH74717	Soybean	plastid	32.85	30.58
KRH69431	Soybean	endoplasmic reticulum, nucleus	32.21	30.44
Bra010100.1-P	Field mustard	cytosol	28.34	30.34
AT5G62580.1	Thale cress	cytosol	29.63	29.92
CDY46411	Canola	plastid	29.15	29.87
Bra016316.1-P	Field mustard	plastid	28.99	29.7
CDX87253	Canola	cytosol	28.34	29.68
AT1G27210.1	Thale cress	plastid	29.31	29.12
CDY16232	Canola	plastid	28.82	28.41
Bra024646.1-P	Field mustard	plastid	29.15	28.37
PGSC0003DMT400058293	Potato	extracellular	28.18	27.26
Solyc05g006550.2.1	Tomato	cytosol	28.18	26.36
CDY14680	Canola	cytosol, plastid	29.31	25.71
TraesCS5D01G372700.1	Wheat	cytosol	22.38	16.77
TraesCS2D01G226900.1	Wheat	plastid	22.38	15.71

Protein Annotations

EnsemblPlants:TraesCS6D01G290800.1	EnsemblPlantsGene:TraesCS6D01G290800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:ARM-type_fold
InterPro:TORTIFOLIA1/SPIRAL2-like	ncoils:Coil	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	SEG:seg	SUPFAM:SSF48371
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:401197004..401200457

Molecular Weight (calculated)

66632.3 Da

IEP (calculated)

9.867

GRAVY (calculated)

-0.352

Length

621 amino acids

Sequence
(BLAST)

001: MGTAARPRGA PEPLKQRVNR CLLRLSDRDT EAMAAAELDA IARALAADEL AAFVSAVSDA RPTDKTPLRR HSLRLLALVA ASHPREAVAP LVPRILAAAL
101: RRVRDQDSSV RGALVDAARA AAAASASAAA ALGPLADALL HEQDQCAQLA AALATVAAVE ASPLTADLAS YLHKLQPRLL KLLRSNAFKA KPALIALIGA
201: SAAVAGDAEV TASIPCLREA IASDDWAARK AAAEALAAFA LEYKDLLMTY KSSCLAYFEA RRVDKVKIVR DSMSRMIEAW KEIPDIEEEE LSSCTAPASL
301: SQRRSSLAGS VSDGRYPAAS LGSNSVQSAT RKNRLPTSRS PPPDVSPGVT RKHSPSSIRN KRLSPPSDRK VGQAKNCDYK VDTAIAPDAT PIKEVTEEKL
401: LKGGNLRSRL ETRRALFQGN EERATKLAGA KAGSRVVPYE CGGNMEEISE VEGGSERAQS GLKDEGLSEI RSQLLQIEKQ QTGLLDLLQK FMGKSENGMN
501: SLETRVHGLE MALDEISRDL AVSSERMSSS EPRVNTCCIL SPKFWRRHDG GRNSSRFSAS SVPNSSEGSR TSYKWERQKF GVQGGFVTNP LAEPNISSVG
601: RTAITQEGRR KDLALQKSRV G

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.