Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G221200.6 | Wheat | plastid | 98.76 | 98.76 |
| HORVU2Hr1G046160.2 | Barley | cytosol, plastid | 75.25 | 95.55 |
| TraesCS2B01G246900.8 | Wheat | plastid | 94.35 | 94.56 |
| Os07t0520400-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 78.76 | 77.88 |
| EER99458 | Sorghum | plastid | 79.44 | 76.25 |
| Zm00001d021641_P002 | Maize | plastid | 76.05 | 72.6 |
| Zm00001d006504_P005 | Maize | plastid | 69.94 | 66.63 |
| GSMUA_Achr9P11640_001 | Banana | cytosol | 54.69 | 56.21 |
| GSMUA_Achr9P02790_001 | Banana | plastid | 42.94 | 50.73 |
| PGSC0003DMT400037390 | Potato | plastid | 46.78 | 48.03 |
| VIT_19s0090g00020.t01 | Wine grape | plastid | 50.28 | 47.44 |
| Solyc10g006350.2.1 | Tomato | plastid | 45.65 | 46.76 |
| KRG98830 | Soybean | plastid | 48.02 | 46.05 |
| KRH46114 | Soybean | plastid | 46.55 | 44.49 |
| Bra030470.1-P | Field mustard | cytosol | 36.72 | 42.04 |
| CDY29609 | Canola | cytosol | 36.5 | 41.79 |
| CDY29271 | Canola | plastid | 39.66 | 40.77 |
| AT1G50890.1 | Thale cress | plastid | 37.63 | 40.56 |
| AT4G27060.1 | Thale cress | plastid | 38.98 | 39.93 |
| CDY07335 | Canola | cytosol | 36.16 | 38.6 |
| CDX89282 | Canola | plastid | 39.21 | 36.49 |
| Bra026382.1-P | Field mustard | plastid | 38.76 | 34.79 |
| TraesCS5D01G372700.1 | Wheat | cytosol | 23.16 | 24.73 |
| TraesCS6D01G290800.1 | Wheat | mitochondrion | 15.71 | 22.38 |
| TraesCS7D01G199100.1 | Wheat | plastid | 15.59 | 19.55 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G226900.1 | EnsemblPlantsGene:TraesCS2D01G226900 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:TORTIFOLIA1/SPIRAL2-like | ncoils:Coil | PANTHER:PTHR31355 |
| PANTHER:PTHR31355:SF7 | SEG:seg | SUPFAM:SSF48371 | MapMan:20.1.5.3 | : | : |
Description
No Description!
Coordinates
chr2D:+:195288756..195295640
Molecular Weight (calculated)
94649.5 Da
IEP (calculated)
5.280
GRAVY (calculated)
-0.465
Length
885 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAISKSST KSHPRSPTTA QPPNPASAAA AAGAAPSKSA AMAELKSRVL SALAKLSDRD THHIAVEELD RFIRSPPSPD AVPMLLHALA SDTQGLASPA
101: RRESIRLLAT LCAAHPDAAA PHLQKVMAHL SRRLKDTASD SSVRDACRDA AGQLAAVYLR PLAASAAGEA GNGTVALFVK PLFEVMGEQS KTVQSGAAAC
201: LAKTVEGAGP GPGVLAMFGK LGSRVFKLVG GQGVQAKGSL LNVIGSLAQV GAISPQNMQQ TLQSIRDCLE NSDWATRKAA ADTLCVLATY SGHLIGDGAA
301: PTIAALEACR FDKVRPVRDS VIDAVQLWKQ LTGEDTNEDG KTKEATGSET KLDSPSNNEK AKGSSIAEKA AVLLKKRPTL TDRELNPDFF QKLETRTTDD
401: LAVEVVVPRK TLQSHLQSED DPEEVDGDPV GAANSNGSAD DEGSLTQVRA SSSFQSVRNK WAGQRGNRNK DAKARPSDVE DRCETSAKDS APMTIPGDGP
501: FINNKTNWLV IQKQLSQLER QQTSLMNMLQ DFMGGSHDSM VTLENRVRGL ERVVEEMARD ISLSSGRRGG GSTLGFDSSP GRSSAKYNGF HEYSNSKFGR
601: GGDGRIGFAD RYFSADGMAS GVRSPSWRPD SEQWDSYAYS GSRSGMNSRR GLDSFSSDTR VPRNGNDQAG PRRGWDKGQG PFRFGEGPSA RSAWRASKDE
701: ATLEAIRVAG EDNGSSRAAA RVAIPELDGE ALNDDSQGDG RGPLWESWTR AMDAIHVGDM DSAYAEVLST GDAELLVKLM EQTGPVVDQL SNEVSNEVLH
801: AVGQFLVEES FYDIALSWLQ QLTDLVMENG SDYLGIPRDA KNDLLFGLHE ATAIELPDDW EGATPVQIMK QLASSWRIDL QQLIN
101: RRESIRLLAT LCAAHPDAAA PHLQKVMAHL SRRLKDTASD SSVRDACRDA AGQLAAVYLR PLAASAAGEA GNGTVALFVK PLFEVMGEQS KTVQSGAAAC
201: LAKTVEGAGP GPGVLAMFGK LGSRVFKLVG GQGVQAKGSL LNVIGSLAQV GAISPQNMQQ TLQSIRDCLE NSDWATRKAA ADTLCVLATY SGHLIGDGAA
301: PTIAALEACR FDKVRPVRDS VIDAVQLWKQ LTGEDTNEDG KTKEATGSET KLDSPSNNEK AKGSSIAEKA AVLLKKRPTL TDRELNPDFF QKLETRTTDD
401: LAVEVVVPRK TLQSHLQSED DPEEVDGDPV GAANSNGSAD DEGSLTQVRA SSSFQSVRNK WAGQRGNRNK DAKARPSDVE DRCETSAKDS APMTIPGDGP
501: FINNKTNWLV IQKQLSQLER QQTSLMNMLQ DFMGGSHDSM VTLENRVRGL ERVVEEMARD ISLSSGRRGG GSTLGFDSSP GRSSAKYNGF HEYSNSKFGR
601: GGDGRIGFAD RYFSADGMAS GVRSPSWRPD SEQWDSYAYS GSRSGMNSRR GLDSFSSDTR VPRNGNDQAG PRRGWDKGQG PFRFGEGPSA RSAWRASKDE
701: ATLEAIRVAG EDNGSSRAAA RVAIPELDGE ALNDDSQGDG RGPLWESWTR AMDAIHVGDM DSAYAEVLST GDAELLVKLM EQTGPVVDQL SNEVSNEVLH
801: AVGQFLVEES FYDIALSWLQ QLTDLVMENG SDYLGIPRDA KNDLLFGLHE ATAIELPDDW EGATPVQIMK QLASSWRIDL QQLIN
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.