Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G046160.2 | Barley | cytosol, plastid | 76.1 | 96.41 |
| TraesCS2D01G226900.1 | Wheat | plastid | 94.56 | 94.35 |
| TraesCS2A01G221200.6 | Wheat | plastid | 94.0 | 93.79 |
| Os07t0520400-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 81.65 | 80.56 |
| EER99458 | Sorghum | plastid | 80.07 | 76.68 |
| Zm00001d021641_P002 | Maize | plastid | 78.26 | 74.54 |
| Zm00001d006504_P005 | Maize | plastid | 72.37 | 68.78 |
| GSMUA_Achr9P11640_001 | Banana | cytosol | 55.49 | 56.91 |
| GSMUA_Achr9P02790_001 | Banana | plastid | 43.04 | 50.73 |
| VIT_19s0090g00020.t01 | Wine grape | plastid | 50.62 | 47.65 |
| PGSC0003DMT400037390 | Potato | plastid | 46.21 | 47.33 |
| Solyc10g006350.2.1 | Tomato | plastid | 45.64 | 46.64 |
| KRG98830 | Soybean | plastid | 47.57 | 45.5 |
| KRH46114 | Soybean | plastid | 47.34 | 45.14 |
| Bra030470.1-P | Field mustard | cytosol | 36.92 | 42.17 |
| CDY29609 | Canola | cytosol | 36.69 | 41.91 |
| AT1G50890.1 | Thale cress | plastid | 37.37 | 40.19 |
| CDY29271 | Canola | plastid | 38.96 | 39.95 |
| AT4G27060.1 | Thale cress | plastid | 38.62 | 39.47 |
| CDY07335 | Canola | cytosol | 36.35 | 38.72 |
| CDX89282 | Canola | plastid | 38.39 | 35.65 |
| Bra026382.1-P | Field mustard | plastid | 38.39 | 34.38 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 23.1 | 24.64 |
| TraesCS6B01G341700.1 | Wheat | mitochondrion | 15.63 | 22.26 |
| TraesCS7B01G103000.1 | Wheat | plastid | 15.74 | 19.69 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G246900.8 | EnsemblPlantsGene:TraesCS2B01G246900 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:TORTIFOLIA1/SPIRAL2-like | ncoils:Coil | PANTHER:PTHR31355 |
| PANTHER:PTHR31355:SF7 | SEG:seg | SUPFAM:SSF48371 | MapMan:20.1.5.3 | : | : |
Description
No Description!
Coordinates
chr2B:+:251368622..251375528
Molecular Weight (calculated)
94617.6 Da
IEP (calculated)
5.280
GRAVY (calculated)
-0.462
Length
883 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAVSKSKS HPRSPTTAQP LNPASAAAAA GAAPSKSAAM AELKSRVLSA LAKLSDRDTH HIAVEELDRF IRSPPSPDAV PMLLHALASD TQGLASPARR
101: ESIRLLATLC AVHPDAAAPH LQKVMAHLSR RLKDTASDSS VRDACRDAVG QLAAVYLRPL AASAAGEAGN GTVALFVKPL FEVMGEQSKT VQSGAAACLA
201: KTVEGAGPGP GVLGMFGKLG SRVFKLVGGQ GVQAKGSLLN VIGSLAQVGA ISPQNMQQTL QSIRDCLENS DWATRKAAAD TLCVLATYSG HLIGDGAAPT
301: IAALEACRFD KVRPVRDSVI DAVQLWKQLT GEDTNEDGKT KEATGSETKL DSPSNNEKAK GSSIAEKAAV LLKKRPTLTD RELNPDFFQK LETRTTDDLA
401: VEVVVPRKTL QSHLQSEDDP EEVDGDPVGA ANSNGSADDE GSLTQVRASS SFQNVRNKWA GQRGNRNKDA KARPSDVEDR CETSAKDSAP MTIPGDGPFI
501: NNKTNWLVIQ KQLSQLERQQ TSLMNMLQDF MGGSHDSMVT LENRVRGLER VVEEMARDIS LSSGRRGGGS TLGFDSSPGR SSAKYNGFHE YSNSKFGRGG
601: DGRIGFADRY FSADGMASGV RSPSWRPDSE QWDSYTYSGS RSGMNSRRGL DSFSSDTRVP RNGNDQAGPR RGWDKGQGPF RFGEGPSARS AWRASKDEAT
701: LEAIRVAGED NGSSRAAARV AIPELDGEAL NDDNQGDGRG PLWESWTRVM DAIHVGDMDS AYAEVLSTGD AELLVKLMEQ TGPVVDQLSN EVSNEVLHAV
801: GQFLVEESFY DIALSWLQQL TDLVMENGSD YLGIPRDAKN DLLFGLHEAT AIELPDDWEG ATPVQIMKQL ASSWRIDLQQ LIN
101: ESIRLLATLC AVHPDAAAPH LQKVMAHLSR RLKDTASDSS VRDACRDAVG QLAAVYLRPL AASAAGEAGN GTVALFVKPL FEVMGEQSKT VQSGAAACLA
201: KTVEGAGPGP GVLGMFGKLG SRVFKLVGGQ GVQAKGSLLN VIGSLAQVGA ISPQNMQQTL QSIRDCLENS DWATRKAAAD TLCVLATYSG HLIGDGAAPT
301: IAALEACRFD KVRPVRDSVI DAVQLWKQLT GEDTNEDGKT KEATGSETKL DSPSNNEKAK GSSIAEKAAV LLKKRPTLTD RELNPDFFQK LETRTTDDLA
401: VEVVVPRKTL QSHLQSEDDP EEVDGDPVGA ANSNGSADDE GSLTQVRASS SFQNVRNKWA GQRGNRNKDA KARPSDVEDR CETSAKDSAP MTIPGDGPFI
501: NNKTNWLVIQ KQLSQLERQQ TSLMNMLQDF MGGSHDSMVT LENRVRGLER VVEEMARDIS LSSGRRGGGS TLGFDSSPGR SSAKYNGFHE YSNSKFGRGG
601: DGRIGFADRY FSADGMASGV RSPSWRPDSE QWDSYTYSGS RSGMNSRRGL DSFSSDTRVP RNGNDQAGPR RGWDKGQGPF RFGEGPSARS AWRASKDEAT
701: LEAIRVAGED NGSSRAAARV AIPELDGEAL NDDNQGDGRG PLWESWTRVM DAIHVGDMDS AYAEVLSTGD AELLVKLMEQ TGPVVDQLSN EVSNEVLHAV
801: GQFLVEESFY DIALSWLQQL TDLVMENGSD YLGIPRDAKN DLLFGLHEAT AIELPDDWEG ATPVQIMKQL ASSWRIDLQQ LIN
001: MSTPTTSGSA AKPTRPARSS SLATRSCSNS GSLTSFQAMV ELKQKILTSI SKLADRDTYQ IAVEDLEKTI QSLTPETLPM FLNCLYDSCS DPKPAVKKEC
101: LHLLSYVCSL HCDSTAAHLT KIIAQIVKRL KDSDSGVRDA CRDTIGALSG IYLKGKEEGT NTGSASLAVG LFVKPLFEAM GEQNKVVQSG ASMCMARMVE
201: SAASPPVTSF QKLCPRICKL LSNSSFLAKA SLLPVVSSLS QVGAIAPQSL ESLLESIHDC LGSTDWVTRK AAAETLTALA SHSSGLIKEK TDSTITVLET
301: CRFDKIKPVR ESVTEALQLW KKISGKYVDG ASDDSKLSAS EQLGSEKNGE KRSNLADLMK KEASDGSTLS PDSASKGKGC FPEKAVGLLK KKAPVLSDKD
401: FNPEFFQRLE RRQSVEVVVP RRCKNNDEEE SGLDDLNAMG SSNRLKNTQA DDKQVKGRFD GNGSQARTSG DDKAGVVNGK ETPGHHAPVS NTDNQSEGSF
501: TSNRGNWSAI QRQLLQLERQ QTNLMNMLQE FIGGSHDSMV TLEGRVRGLE RIVEDMARDL SISSGRRANL TAGFGKYNSF ANYPTGKYNG RAPGERGSQT
601: DGAMRGRMWN SDMADDWFIP PHAASRNGQA GPRRSPRSEQ YENEHMGNGR RGWDNKASGT IRFGEGPSAR SVWQASKDEA TLEAIRVAGE DGAVPRPTRV
701: AVAPEAEAMG DDDNEGQERD PIWVSWSNAM HSLRVGDIDA AYAEVLCAGD QHLVIKLMDK TGPSLDQMSN EIANEALNFI SQFLLDHSLY DICLSWSQQL
801: LELVLQDGAD TFGVPMELKT EILYNLQDAC STMDPPEDWE GPAPEQLVVQ LASVWEIDLQ QFDK
101: LHLLSYVCSL HCDSTAAHLT KIIAQIVKRL KDSDSGVRDA CRDTIGALSG IYLKGKEEGT NTGSASLAVG LFVKPLFEAM GEQNKVVQSG ASMCMARMVE
201: SAASPPVTSF QKLCPRICKL LSNSSFLAKA SLLPVVSSLS QVGAIAPQSL ESLLESIHDC LGSTDWVTRK AAAETLTALA SHSSGLIKEK TDSTITVLET
301: CRFDKIKPVR ESVTEALQLW KKISGKYVDG ASDDSKLSAS EQLGSEKNGE KRSNLADLMK KEASDGSTLS PDSASKGKGC FPEKAVGLLK KKAPVLSDKD
401: FNPEFFQRLE RRQSVEVVVP RRCKNNDEEE SGLDDLNAMG SSNRLKNTQA DDKQVKGRFD GNGSQARTSG DDKAGVVNGK ETPGHHAPVS NTDNQSEGSF
501: TSNRGNWSAI QRQLLQLERQ QTNLMNMLQE FIGGSHDSMV TLEGRVRGLE RIVEDMARDL SISSGRRANL TAGFGKYNSF ANYPTGKYNG RAPGERGSQT
601: DGAMRGRMWN SDMADDWFIP PHAASRNGQA GPRRSPRSEQ YENEHMGNGR RGWDNKASGT IRFGEGPSAR SVWQASKDEA TLEAIRVAGE DGAVPRPTRV
701: AVAPEAEAMG DDDNEGQERD PIWVSWSNAM HSLRVGDIDA AYAEVLCAGD QHLVIKLMDK TGPSLDQMSN EIANEALNFI SQFLLDHSLY DICLSWSQQL
801: LELVLQDGAD TFGVPMELKT EILYNLQDAC STMDPPEDWE GPAPEQLVVQ LASVWEIDLQ QFDK
Arabidopsis Description
TOR1Microtubule-associated protein TORTIFOLIA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9T041]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.