Factsheet for TraesCS6B01G341700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G311500.1	Wheat	cytosol	93.06	97.96
TraesCS6D01G290800.1	Wheat	mitochondrion	97.9	97.75
EES05553	Sorghum	cytosol	80.48	81.01
Os02t0739900-01	Rice	cytosol, mitochondrion	78.06	79.08
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	77.1	78.1
HORVU6Hr1G076760.1	Barley	nucleus	72.58	73.05
Zm00001d016462_P001	Maize	cytosol	43.71	63.92
TraesCS7B01G103000.1	Wheat	plastid	63.71	55.95
Zm00001d044701_P001	Maize	cytosol	39.35	50.1
CDX68449	Canola	cytosol	5.97	50.0
GSMUA_Achr7P02250_001	Banana	cytosol	39.84	44.5
Zm00001d017306_P002	Maize	cytosol	19.52	38.41
KRH03379	Soybean	cytosol, mitochondrion	36.77	37.38
KRH57001	Soybean	cytosol	36.45	36.99
KRH63453	Soybean	cytosol	35.32	35.21
VIT_17s0000g07470.t01	Wine grape	cytosol	35.81	34.8
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	25.48	34.42
Bra007853.1-P	Field mustard	nucleus	11.77	34.27
CDY24496	Canola	plastid	25.65	34.27
KRH54469	Soybean	cytosol	34.35	34.19
AT1G59850.1	Thale cress	plastid	27.1	33.73
CDY33611	Canola	cytosol, nucleus, plastid	24.84	33.7
PGSC0003DMT400063183	Potato	cytosol	33.71	33.66
Bra035889.1-P	Field mustard	cytosol	29.68	32.74
Solyc03g113680.2.1	Tomato	nucleus	32.9	32.59
CDY16768	Canola	cytosol	28.71	32.36
VIT_01s0026g01020.t01	Wine grape	cytosol	33.55	32.25
CDY62371	Canola	plastid	26.13	31.27
CDY00306	Canola	cytosol	28.87	30.81
CDY56641	Canola	cytosol	28.39	30.5
KRH74717	Soybean	plastid	32.74	30.43
KRH69431	Soybean	endoplasmic reticulum, nucleus	32.1	30.29
Bra010100.1-P	Field mustard	cytosol	28.23	30.17
CDY46411	Canola	plastid	29.19	29.87
AT5G62580.1	Thale cress	cytosol	29.52	29.76
Bra016316.1-P	Field mustard	plastid	29.03	29.7
CDX87253	Canola	cytosol	28.23	29.51
AT1G27210.1	Thale cress	plastid	29.68	29.44
CDY16232	Canola	plastid	29.35	28.89
Bra024646.1-P	Field mustard	plastid	29.68	28.84
PGSC0003DMT400058293	Potato	extracellular	28.55	27.57
Solyc05g006550.2.1	Tomato	cytosol	28.23	26.36
CDY14680	Canola	cytosol, plastid	29.68	25.99
TraesCS5B01G365600.1	Wheat	cytosol	22.26	16.67
TraesCS2B01G246900.8	Wheat	plastid	22.26	15.63

Protein Annotations

EnsemblPlants:TraesCS6B01G341700.1	EnsemblPlantsGene:TraesCS6B01G341700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:ARM-type_fold
InterPro:TORTIFOLIA1/SPIRAL2-like	ncoils:Coil	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	SEG:seg	SUPFAM:SSF48371
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:601341957..601345925

Molecular Weight (calculated)

66671.3 Da

IEP (calculated)

10.046

GRAVY (calculated)

-0.367

Length

620 amino acids

Sequence
(BLAST)

001: MGTAARPRGA PEPLKQRVNR CLLRLSDRDT EAMAAAELDA VARTLAADEL AAFVSAVSDA RPTDKTPLRR HSLRLLALVA ASHPRDAVAP LVPRILAAAL
101: RRVRDQDSSV RGALVDAARA AAAASASAAA ALGPLADALL HEQDQCAQLA AALATVAAVE ASPLTANLAS YLHKLQPRLL KLLRSNAFKA KPALIALIGA
201: SAAVAGDAEV TASIPCLREA IASDDWAARK AAAEALAAFA LEYKDLLMTY KSSCLAYFEA RRFDKVKIVR DSMSRMIEAW KEIPDIEEEE LSSCTAPASL
301: SQRRSSLAGS VSDGRYPAAS LGSNSVQSAT RKNRLPTSRS PPPDVSPGVT RKHSPSSIRN KRLSPPSNRK VGQAKNCDHK VDTAITPDAT PIKEVTEEKL
401: LKGGNLRSRL ETRRTLFQGN EERATKLAGA KAGSRVVPYE CGNMEEISEV EGGSERVQSG LKDEGLSEIR SQLLQIEKQQ TGLLDLLQKF MGKSENGMNS
501: LETRVHGLEM ALDEISRDLA VSSERMSSSE PRVNTCCILS PKFWRRHDGG RNSSRFSASS VPNSSEGSRT SYKWERQKFG VQGGFVTNPL AEPNISSVGR
601: TAVTQEGRRK DLALQKSRVG

Best Arabidopsis Sequence Match ( AT1G27210.1 )
(BLAST)

001: MSVHGRFPAS PPISLSPSSS STSPSSQSPS TPPDLKQRVI ACLNKLADRD TLALASAELD SIARNLTHDS FSPFLNCIHN TDSSVKSPVR KQCVALLSVL
101: SRYHGDSLTP HLAKMVSTVI RRLRDPDSSV RSACAVATAD MSAHVTRQPF ASVAKPLIET LIQEGDSNLQ IGAALCLAAS VDAATDPESE QLRKSLPKIG
201: KLLKSDGFKA KAALLSAVGS IITAGGAGTK PVLDWLVPVL IEFLSSEDWA ARKSAAEALG KVATAEDLAS QYKKTCTTAL ESRRFDKVKS VRETMNRALN
301: LWKEVSTDDE ASLSPSRSST DDGNIGCFSS VTRSSTIDVG LKSARPKKVT PIMKRSPSLP VNRSYAATRQ KENLPKRNQG NMTMLVEEAS SVDNKGPHFT
401: PVKKSSEETE EKANSGGPDI IKHTISEKSR EDSKVSSFGG LRSGSRVAPC SDDGDSVKNC KDDVEESKKD SEELSLIREQ LALIENQQSS LLDLLQKFMG
501: TSQSGIQSLE SRVSGLEMAL DEISCDLAVS NGRVPRNSSG CAGDSCSKLP GTEFLSPKFW RKTEERPRNR NTANEMAAYD QGMRESTDTN NGQRGGSVFQ
601: KRSRRDQFQD CMHTTLQKPT TRLST

Arabidopsis Description

TOR1L4TORTIFOLIA1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.