CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035889.1-P	Field mustard	cytosol	94.18	92.17
CDX87253	Canola	cytosol	78.91	73.19
CDY56641	Canola	cytosol	70.91	67.59
CDY00306	Canola	cytosol	68.91	65.23
AT5G62580.1	Thale cress	cytosol	66.91	59.84
CDX68449	Canola	cytosol	6.91	51.35
KRH57001	Soybean	cytosol	44.36	39.93
KRH03379	Soybean	cytosol, mitochondrion	43.82	39.51
KRH54469	Soybean	cytosol	44.55	39.33
KRH63453	Soybean	cytosol	43.45	38.42
VIT_17s0000g07470.t01	Wine grape	cytosol	43.82	37.77
PGSC0003DMT400063183	Potato	cytosol	42.36	37.52
CDY33611	Canola	cytosol, nucleus, plastid	30.55	36.76
Solyc03g113680.2.1	Tomato	nucleus	41.82	36.74
CDY24496	Canola	plastid	30.73	36.42
CDY62371	Canola	plastid	32.55	34.56
CDY46411	Canola	plastid	36.91	33.5
CDY16232	Canola	plastid	37.64	32.86
TraesCS7A01G236800.1	Wheat	cytosol	35.09	30.78
HORVU7Hr1G040280.1	Barley	peroxisome	34.0	30.16
Zm00001d044760_P001	Maize	cytosol	32.91	29.82
Os06t0244700-01	Rice	cytosol	28.36	29.55
Zm00001d037271_P001	Maize	cytosol	32.91	29.48
CDY14680	Canola	cytosol, plastid	37.64	29.24
KXG19701	Sorghum	cytosol	32.73	29.08
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	32.18	28.92
EES05553	Sorghum	cytosol	32.36	28.9
TraesCS6A01G311500.1	Wheat	cytosol	30.91	28.86
TraesCS6D01G290800.1	Wheat	mitochondrion	32.55	28.82
TraesCS6B01G341700.1	Wheat	mitochondrion	32.36	28.71
GSMUA_Achr7P02250_001	Banana	cytosol	28.91	28.65
Os02t0739900-01	Rice	cytosol, mitochondrion	31.82	28.59
TraesCS7B01G103000.1	Wheat	plastid	35.27	27.48
TraesCS7D01G199100.1	Wheat	plastid	34.73	27.05
Zm00001d016462_P001	Maize	cytosol	18.18	23.58
Zm00001d017306_P002	Maize	cytosol	13.45	23.49
HORVU6Hr1G076760.1	Barley	nucleus	24.91	22.24
Zm00001d044701_P001	Maize	cytosol	18.91	21.36
CDY38410	Canola	nucleus	24.55	17.2
CDX78782	Canola	nucleus	24.91	16.37
CDY29271	Canola	plastid	25.09	16.03
CDX89282	Canola	plastid	25.27	14.62
CDY29609	Canola	cytosol	20.36	14.49
CDY07335	Canola	cytosol	21.64	14.35

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A078FWF4	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDY16768
ProteinID:CDY16768	ProteinID:CDY16768.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	EnsemblPlantsGene:GSBRNA2T00094644001
InterPro:HEAT	InterPro:IPR011989	PFAM:PF02985	PANTHER:PTHR31355	PANTHER:PTHR31355:SF8	SUPFAM:SSF48371
InterPro:TORTIFOLIA1/SPIRAL2-like	UniParc:UPI0004EEB472	SEG:seg	:	:	:

Description

BnaA09g06140DBnaA09g06140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWF4]

Coordinates

chrLK032067:-:256518..259096

Molecular Weight (calculated)

59624.4 Da

IEP (calculated)

9.342

GRAVY (calculated)

-0.344

Length

550 amino acids

Sequence
(BLAST)

001: MEKSSKQKMS ELLTKLGDRD TFTMAAKELD LMARNIDPTS GNLQSFISVV LSTDAGDKPA VRKHCIHLLA VLSVSLPPNS LSPHLSKILS RVTRRLRDPD
101: SSVRSACVAA VSAIASRTTK PPFGSAFVKP LSEALFTEQE VNAQIGAGLC LAAAIDAAED PDPVRLGTTL LPRLEKLVKC NAFKAKPAGV VVIGSVIGAG
201: GVSGAAGGLK GLVDCLVSVL SSEDWAARKA AAEALGRLAT VERNGLGEFK AKCLKIFESK RYDKVKTVRE VMNEMMEAWT QVPDLSEEAS PPRSNASSKG
301: SGVASTPAKS RTREVNRSTP PGSSIATVAR RRTNVRSSDQ KKTSSVPSHT KLNVRRRLEL NAGGGASVLC GEPLEEEHHH HNENTKEADH SNHEKMQSLT
401: GDHVLSENQN SSNNCKGLED MSLIRSQLVQ IEQQQSNLMD LLQRFVGSSQ HGMISLETRV QGLEIALDEI SYDLAVSNGR MSNGSSRNNC CLIPPGSFIR
501: SKFWKKPDSM YSASRLLKFD QIMDLQVCLT IKERRETHPS KILRLGNHCV

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.