CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	98.49	99.56
CDY33611	Canola	cytosol, nucleus, plastid	86.85	88.18
AT1G59850.1	Thale cress	plastid	69.83	65.06
CDY46411	Canola	plastid	48.71	37.29
CDY62371	Canola	plastid	41.16	36.87
CDY16232	Canola	plastid	49.78	36.67
VIT_01s0026g01020.t01	Wine grape	cytosol	45.47	32.71
CDY14680	Canola	cytosol, plastid	49.57	32.49
CDX68449	Canola	cytosol	4.96	31.08
CDY16768	Canola	cytosol	36.42	30.73
KRH69431	Soybean	endoplasmic reticulum, nucleus	42.89	30.29
KRH74717	Soybean	plastid	42.89	29.84
PGSC0003DMT400058293	Potato	extracellular	40.73	29.44
CDY00306	Canola	cytosol	36.64	29.26
CDY56641	Canola	cytosol	35.56	28.6
CDX87253	Canola	cytosol	36.21	28.33
Solyc05g006550.2.1	Tomato	cytosol	39.87	27.86
EES05553	Sorghum	cytosol	34.27	25.81
TraesCS6B01G341700.1	Wheat	mitochondrion	34.27	25.65
TraesCS6D01G290800.1	Wheat	mitochondrion	34.27	25.6
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	33.62	25.49
Os02t0739900-01	Rice	cytosol, mitochondrion	33.19	25.16
Zm00001d037271_P001	Maize	cytosol	33.19	25.08
KXG19701	Sorghum	cytosol	33.41	25.04
TraesCS7A01G236800.1	Wheat	cytosol	33.84	25.04
HORVU7Hr1G040280.1	Barley	peroxisome	33.19	24.84
TraesCS6A01G311500.1	Wheat	cytosol	31.25	24.62
Zm00001d044760_P001	Maize	cytosol	31.9	24.38
GSMUA_Achr7P02250_001	Banana	cytosol	27.8	23.24
Zm00001d016462_P001	Maize	cytosol	21.12	23.11
Os06t0244700-01	Rice	cytosol	26.29	23.11
TraesCS7B01G103000.1	Wheat	plastid	34.27	22.52
TraesCS7D01G199100.1	Wheat	plastid	34.05	22.38
Zm00001d017306_P002	Maize	cytosol	13.79	20.32
Zm00001d044701_P001	Maize	cytosol	20.04	19.1
HORVU6Hr1G076760.1	Barley	nucleus	24.78	18.67
CDY38410	Canola	nucleus	28.45	16.82
CDY29609	Canola	cytosol	27.16	16.3
CDX78782	Canola	nucleus	27.8	15.41
CDY07335	Canola	cytosol	27.37	15.32
CDY29271	Canola	plastid	28.23	15.21
CDX89282	Canola	plastid	28.45	13.88

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A078GGI9	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDY24496
ProteinID:CDY24496	ProteinID:CDY24496.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017
EnsemblPlantsGene:GSBRNA2T00026792001	InterPro:IPR011989	PANTHER:PTHR31355	PANTHER:PTHR31355:SF3	SUPFAM:SSF48371	InterPro:TORTIFOLIA1/SPIRAL2-like
UniParc:UPI0004EDB6B6	SEG:seg	:	:	:	:

Description

BnaA01g22000DBnaA01g22000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGI9]

Coordinates

chrLK032160:-:40550..41993

Molecular Weight (calculated)

50512.2 Da

IEP (calculated)

8.222

GRAVY (calculated)

-0.370

Length

464 amino acids

Sequence
(BLAST)

001: MPSVQMRSSP SVSPPRTVTD LKQRVIACLN RLSDRDTQSL AAAELDSIAL NLSPDAFSLF INCLQTTDSS AKSPVRKHCV SLLSLLSRSH GDSLAPHLPK
101: MVSTVLRRLR DPDTSVRAAC ATASVDMTTN ITEPPFSVLA GPMIEALIHD CDTNAQIGAA VCLAAAIDAA DDPDVEQLQK ALPKIGKLLK SEGFKAKPEL
201: LGAIGSVIGA IGGRNSDKAV LDWLLPNVLE FLSSDDWHAR KAAAEAVARV ATAEEELAPL YKKACLGVLE SRRFDKVKLV RERMNHTLSL WKQLGDDSPD
301: SSSLSKSGKG INTLKSKEKN PNVPTGSKLN DVEDELRPLG TKRVLFPAKP SKVKENRSNK SQAVAVVQSG DEEEESSSSS SSQRKNAEEE LSLIRNQITQ
401: IEKQQSSLLD LFQRFMESSQ NEMQSLGRRV RCLETSFSVL STDLLVSRTI TQNGNHKRNA HLQN

Best Arabidopsis Sequence Match ( AT1G59850.1 )
(BLAST)

001: MPSVQIRSSP SHSQPAMTVT DLKQRVIACL NRLSDRDTLA LAAAELDSIA LNLSPETFSL FINCLQSTDS SAKSPVRKHC VSLLSVLSRS HGDSLAPHLS
101: KMVSTVLRRL RDPDSSVRAA CVAASVDMTT NITGQPFSIL FGPMIETVIH DCDPNAQISA AMCLAAAVDA ADEPDVEQLQ KALPKIGKLL KSEGFKAKAE
201: LLGAIGTVIG AVGGRNSEKA VLDWLLPNVS EFLSSDDWRA RKAAAEAMAR VAMVEEELAP LYKKTCLGIL ESRRFDKVKL VRETMNRTLG LWKQLEGDST
301: EVSESSSSSK SASSGLSATS GKRSNTLKGK DRNLNTPLSS KSNDVEPLDR GDTPKDVEQE AVVSKEKRNR STLGAKRVLF PAKMHKVKEN GSNKSQVVQS
401: SDEESPKTDS GSSSSSQAKS NAEELSLIRH QITQIEKQQS SLLDLFQKFM ESSHNGMQSL ERRVRGLETS FSVISTDLLV SRSITQNGNH KRNACRQN

Arabidopsis Description

TOR1L5TORTIFOLIA1-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.