Factsheet for HORVU6Hr1G076760.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G311500.1	Wheat	cytosol	73.54	76.91
TraesCS6D01G290800.1	Wheat	mitochondrion	73.7	73.11
TraesCS6B01G341700.1	Wheat	mitochondrion	73.05	72.58
EES05553	Sorghum	cytosol	61.69	61.69
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	59.42	59.8
Os02t0739900-01	Rice	cytosol, mitochondrion	59.09	59.48
CDX68449	Canola	cytosol	6.01	50.0
HORVU7Hr1G040280.1	Barley	peroxisome	49.03	48.71
Zm00001d016462_P001	Maize	cytosol	30.84	44.81
Zm00001d044701_P001	Maize	cytosol	31.17	39.43
Zm00001d017306_P002	Maize	cytosol	18.67	36.51
Bra007853.1-P	Field mustard	nucleus	11.2	32.39
GSMUA_Achr7P02250_001	Banana	cytosol	27.6	30.63
KRH57001	Soybean	cytosol	29.06	29.3
KRH03379	Soybean	cytosol, mitochondrion	28.73	29.02
KRH63453	Soybean	cytosol	28.41	28.14
VIT_17s0000g07470.t01	Wine grape	cytosol	28.57	27.59
KRH54469	Soybean	cytosol	27.76	27.45
PGSC0003DMT400063183	Potato	cytosol	26.46	26.25
VIT_01s0026g01020.t01	Wine grape	cytosol	27.11	25.89
Bra035889.1-P	Field mustard	cytosol	23.21	25.44
Solyc03g113680.2.1	Tomato	nucleus	25.81	25.4
AT1G59850.1	Thale cress	plastid	20.45	25.3
CDY00306	Canola	cytosol	23.7	25.13
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	18.67	25.05
CDY56641	Canola	cytosol	23.38	24.96
CDY16768	Canola	cytosol	22.24	24.91
Bra010100.1-P	Field mustard	cytosol	23.38	24.83
CDY24496	Canola	plastid	18.67	24.78
AT5G62580.1	Thale cress	cytosol	24.35	24.39
CDY33611	Canola	cytosol, nucleus, plastid	18.02	24.29
KRH74717	Soybean	plastid	25.81	23.84
KRH69431	Soybean	endoplasmic reticulum, nucleus	25.16	23.59
CDX87253	Canola	cytosol	22.24	23.1
CDY62371	Canola	plastid	19.16	22.78
CDY46411	Canola	plastid	22.4	22.77
Bra016316.1-P	Field mustard	plastid	22.24	22.61
AT1G27210.1	Thale cress	plastid	22.89	22.56
CDY16232	Canola	plastid	22.4	21.9
Bra024646.1-P	Field mustard	plastid	22.56	21.79
PGSC0003DMT400058293	Potato	extracellular	21.59	20.72
CDY14680	Canola	cytosol, plastid	23.05	20.06
Solyc05g006550.2.1	Tomato	cytosol	21.59	20.03
HORVU2Hr1G046160.2	Barley	cytosol, plastid	14.29	12.63
HORVU5Hr1G089280.1	Barley	cytosol	16.88	12.47

Protein Annotations

EnsemblPlants:HORVU6Hr1G076760.1	EnsemblPlantsGene:HORVU6Hr1G076760	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:ARM-type_fold
InterPro:TORTIFOLIA1/SPIRAL2-like	ncoils:Coil	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	SEG:seg	SUPFAM:SSF48371
UniParc:UPI000B46521C	UniProt:A0A287URY3	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:527119054..527122803

Molecular Weight (calculated)

57150.0 Da

IEP (calculated)

10.827

GRAVY (calculated)

-0.497

Length

616 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX AAEAARQPLP
101: PPALGPRHRG HGGGRARRRR ARPGGRRARG LRRRRLRRAP HRQDPAPAPL XLAAALATVA AVEASPLTAD LASYLHKLQP RLLKLLRSNA FKAKPALISL
201: IGASAAVAGD AQVTASIPCL RDAIASDDWA ARKAAAEALA AFALEYKDLL MTHKSSCLAY FEARRFDKVK IVRDSMSRMI EAWKEIPDIE EEELSSCTAP
301: ASLSQRRSSL AGSVSDGRYP AASLGSNSVQ SATRKNRLPT SRSPPPDVLP GVTRKNSPSS IRNKRLSPPS NRKVGQAKNC DYKADTAIAP DATPIKEVTE
401: EKLLKGGNLR SRLETRRALF QGNEAKAGSR VVPYECGGNL EEISEVEGGS ERAQSGLKDE GLSEIRTQLL QIEKQQSGLL DLLQKFMGKS ENGMNSLETR
501: VHGLEMALDE ISRDLAVSSE RMSSSEPRVN TCCILSPKFW RRHDGVRNSS RFSASSVPNS SEGSRTSYKW ERQKFGVQGG FVTNPLAEPN ISSVGRTAVT
601: QEGRRKDLAL QKSSQW

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.