CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03379	Soybean	cytosol, mitochondrion	87.72	87.87
KRH63453	Soybean	cytosol	61.7	60.61
KRH54469	Soybean	cytosol	60.39	59.23
VIT_17s0000g07470.t01	Wine grape	cytosol	56.96	54.55
PGSC0003DMT400063183	Potato	cytosol	47.3	46.54
Solyc03g113680.2.1	Tomato	nucleus	47.46	46.33
Bra035889.1-P	Field mustard	cytosol	41.9	45.55
CDY00306	Canola	cytosol	42.72	44.92
CDY56641	Canola	cytosol	42.39	44.89
CDY16768	Canola	cytosol	39.93	44.36
Bra010100.1-P	Field mustard	cytosol	41.9	44.14
CDX87253	Canola	cytosol	40.26	41.48
AT5G62580.1	Thale cress	cytosol	41.08	40.81
KRH69431	Soybean	endoplasmic reticulum, nucleus	41.9	38.97
KRH74717	Soybean	plastid	42.23	38.68
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	38.63	38.56
EES05553	Sorghum	cytosol	38.63	38.31
Os02t0739900-01	Rice	cytosol, mitochondrion	37.32	37.25
Os06t0244700-01	Rice	cytosol	32.08	37.12
TraesCS6D01G290800.1	Wheat	mitochondrion	37.32	36.72
TraesCS6B01G341700.1	Wheat	mitochondrion	36.99	36.45
TraesCS6A01G311500.1	Wheat	cytosol	35.02	36.33
Zm00001d037271_P001	Maize	cytosol	36.5	36.32
GSMUA_Achr7P02250_001	Banana	cytosol	32.73	36.04
HORVU7Hr1G040280.1	Barley	peroxisome	36.5	35.97
Zm00001d044760_P001	Maize	cytosol	35.68	35.91
KXG19701	Sorghum	cytosol	36.33	35.86
TraesCS7A01G236800.1	Wheat	cytosol	36.5	35.57
TraesCS7D01G199100.1	Wheat	plastid	36.82	31.87
TraesCS7B01G103000.1	Wheat	plastid	36.66	31.73
Zm00001d016462_P001	Maize	cytosol	20.46	29.48
HORVU6Hr1G076760.1	Barley	nucleus	29.3	29.06
Zm00001d044701_P001	Maize	cytosol	19.8	24.85
Zm00001d017306_P002	Maize	cytosol	12.6	24.44
KRH74132	Soybean	cytosol, endoplasmic reticulum, nucleus	25.04	19.01
KRG98830	Soybean	plastid	27.0	17.88
KRH46114	Soybean	plastid	26.19	17.28

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100789197	MapMan:35.1	EMBL:ACUP02002805	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	EnsemblPlantsGene:GLYMA_05G032600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:HEAT
UniProt:I1JZV3	InterPro:IPR011989	EnsemblPlants:KRH57001	ProteinID:KRH57001	ProteinID:KRH57001.1	ProteinID:KRH57002.1
ProteinID:KRH57003.1	ProteinID:KRH57004.1	PFAM:PF02985	PANTHER:PTHR31355	PANTHER:PTHR31355:SF8	SUPFAM:SSF48371
InterPro:TORTIFOLIA1/SPIRAL2-like	UniParc:UPI000233A274	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:2848695..2852187

Molecular Weight (calculated)

66798.9 Da

IEP (calculated)

9.078

GRAVY (calculated)

-0.488

Length

611 amino acids

Sequence
(BLAST)

001: MSSSPQNIKQ RVFTCLTKLS DRDTQSLAAA ELESIARNLD ATTLPAFLSC MYSTDASDKP PVRKQCVHLL GFLAQTHGNM LAPYLSKILG SVVRRLRDVD
101: SSVRSACVNS IAALSGHVSK QPLNSFLKPL AEALFTEQDQ NAQASAALCL ASAIDGAPDP DPARLAKLLP RFEKLLKRDG FKAKPALLTL VGSVVAAGGA
201: SGHAQLKSLV PCLVEALSND DWATRKAAAE TLVVVADVER DFLSEFKGEC VRVFENRRFD KVKLVRDVMN QMLEAWKLVP DVSDEVSPPP KSQSSSKENA
301: SDGRYPQVSQ NSCSPRSMMA NLRRKSTPFS RFSPADSSSA SNAKNTSASS SNKRMSSSVS RKLNHKNWDA QIAVADQGDL QERDGIVSER SKMDKSGVSK
401: PETKRALLNK SSEDKIQKYG GSKAGSRVVP YQEDESQDSV PVSIVSKDLQ RNDKESEDLS LIRDQLHQIE NQQSSLLDLL QKFMGSSQNG MRSLETRVHG
501: LELALDEISY DLAISSGRMT KPDPHGNTCC MLPGAEFLSS KFWRKTHGRD SITRFSRSGG TPSLAAMNYQ ANRDAETKLA NHRFRPDGGF ITNPLAEIHT
601: NSRNFATSEI A

Best Arabidopsis Sequence Match ( AT1G27210.1 )
(BLAST)

001: MSVHGRFPAS PPISLSPSSS STSPSSQSPS TPPDLKQRVI ACLNKLADRD TLALASAELD SIARNLTHDS FSPFLNCIHN TDSSVKSPVR KQCVALLSVL
101: SRYHGDSLTP HLAKMVSTVI RRLRDPDSSV RSACAVATAD MSAHVTRQPF ASVAKPLIET LIQEGDSNLQ IGAALCLAAS VDAATDPESE QLRKSLPKIG
201: KLLKSDGFKA KAALLSAVGS IITAGGAGTK PVLDWLVPVL IEFLSSEDWA ARKSAAEALG KVATAEDLAS QYKKTCTTAL ESRRFDKVKS VRETMNRALN
301: LWKEVSTDDE ASLSPSRSST DDGNIGCFSS VTRSSTIDVG LKSARPKKVT PIMKRSPSLP VNRSYAATRQ KENLPKRNQG NMTMLVEEAS SVDNKGPHFT
401: PVKKSSEETE EKANSGGPDI IKHTISEKSR EDSKVSSFGG LRSGSRVAPC SDDGDSVKNC KDDVEESKKD SEELSLIREQ LALIENQQSS LLDLLQKFMG
501: TSQSGIQSLE SRVSGLEMAL DEISCDLAVS NGRVPRNSSG CAGDSCSKLP GTEFLSPKFW RKTEERPRNR NTANEMAAYD QGMRESTDTN NGQRGGSVFQ
601: KRSRRDQFQD CMHTTLQKPT TRLST

Arabidopsis Description

TOR1L4TORTIFOLIA1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.