Factsheet for TraesCS7A01G236800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G040280.1	Barley	peroxisome	88.2	89.19
TraesCS7B01G103000.1	Wheat	plastid	95.37	84.7
TraesCS7D01G199100.1	Wheat	plastid	92.34	82.01
Zm00001d037271_P001	Maize	cytosol	70.18	71.66
Zm00001d044760_P001	Maize	cytosol	68.26	70.51
Os06t0244700-01	Rice	cytosol	59.17	70.27
KXG19701	Sorghum	cytosol	67.62	68.5
TraesCS6A01G311500.1	Wheat	cytosol	60.77	64.69
CDX68449	Canola	cytosol	6.06	51.35
GSMUA_Achr7P02250_001	Banana	cytosol	37.32	42.16
KRH57001	Soybean	cytosol	35.57	36.5
KRH03379	Soybean	cytosol, mitochondrion	34.93	35.9
Bra035889.1-P	Field mustard	cytosol	31.74	35.41
VIT_17s0000g07470.t01	Wine grape	cytosol	35.89	35.27
CDY16768	Canola	cytosol	30.78	35.09
CDY33611	Canola	cytosol, nucleus, plastid	25.36	34.79
AT1G59850.1	Thale cress	plastid	27.27	34.34
KRH63453	Soybean	cytosol	33.97	34.24
KRH54469	Soybean	cytosol	33.97	34.19
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	24.88	33.99
CDY24496	Canola	plastid	25.04	33.84
PGSC0003DMT400063183	Potato	cytosol	33.33	33.66
Solyc03g113680.2.1	Tomato	nucleus	32.54	32.59
CDY56641	Canola	cytosol	29.67	32.24
CDY00306	Canola	cytosol	29.67	32.01
Bra007853.1-P	Field mustard	nucleus	10.85	31.92
VIT_01s0026g01020.t01	Wine grape	cytosol	32.7	31.78
CDX87253	Canola	cytosol	29.98	31.7
Bra010100.1-P	Field mustard	cytosol	29.19	31.55
CDY62371	Canola	plastid	25.84	31.27
KRH69431	Soybean	endoplasmic reticulum, nucleus	32.38	30.9
KRH74717	Soybean	plastid	32.54	30.58
AT5G62580.1	Thale cress	cytosol	29.82	30.41
AT1G27210.1	Thale cress	plastid	29.98	30.08
CDY46411	Canola	plastid	29.03	30.03
Bra016316.1-P	Field mustard	plastid	29.03	30.03
CDY16232	Canola	plastid	29.98	29.84
Bra024646.1-P	Field mustard	plastid	30.3	29.78
PGSC0003DMT400058293	Potato	extracellular	30.14	29.44
Solyc05g006550.2.1	Tomato	cytosol	29.19	27.56
CDY14680	Canola	cytosol, plastid	29.98	26.55
TraesCS5A01G363500.1	Wheat	cytosol	22.33	16.89
TraesCS2A01G221200.6	Wheat	plastid	22.33	15.82

Protein Annotations

EnsemblPlants:TraesCS7A01G236800.1	EnsemblPlantsGene:TraesCS7A01G236800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:ARM-type_fold
InterPro:TORTIFOLIA1/SPIRAL2-like	ncoils:Coil	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	SEG:seg	SUPFAM:SSF48371
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:210850645..210854590

Molecular Weight (calculated)

66995.2 Da

IEP (calculated)

8.150

GRAVY (calculated)

-0.408

Length

627 amino acids

Sequence
(BLAST)

001: MGPAPRAGGE PMKQRVNRCL HRLSDRDTEA MAANELDAIA RGLDADELPV FLAAVSDTRA TDKAPLRRHS LRLLALLVAA HPRDAVAPLV PRLVAAALRR
101: VRDPDSSVRA ALVDAARAIA GAAAPPAAPA ALGPLADAVL HEQDQCAQLA AALAAAAAVE ASAPTADLAD YLLALLPRLL KLLRSAAFKA KPALISLIGA
201: ASAATDGEGA ATAVPCLRDA LAGDDWAARK AAAEALALLA LEHGDDLAAH KPSCIAVFEA KRFDKVKIVR ESMNRMIEAW REIPDAEEDV CSSGASPAQT
301: RSPSLADSAS DGRYPADSLG SNSVQSVTKR NMLPASRSPP SVSNRRTSPS IRSKKSSPPS RGCGGGVDQA KKCDYKVDVA VAADATPIRT VTGEKLLKEG
401: NVRARLEARK MLFQKSGEKG YNKVAGRKSG SRVVPFNGDG DSEESTEVED DGPEEVQSDH SSEELQLVHK DEDLSKIRMQ LVQIENQQTN LLDLLQKFMG
501: SSQNGIRSLE TRVNGLEMAL DEISRDLAAS SGRMPSSEPD MNCCIPSPKF WRKNEGGRYT SRYPVSDLAN HSEESRASSK WERQKFGVQG GFVTNPLAEP
601: NTSYVRSTLV AQEGRRQNSA QYKARTR

Best Arabidopsis Sequence Match ( AT1G27210.1 )
(BLAST)

001: MSVHGRFPAS PPISLSPSSS STSPSSQSPS TPPDLKQRVI ACLNKLADRD TLALASAELD SIARNLTHDS FSPFLNCIHN TDSSVKSPVR KQCVALLSVL
101: SRYHGDSLTP HLAKMVSTVI RRLRDPDSSV RSACAVATAD MSAHVTRQPF ASVAKPLIET LIQEGDSNLQ IGAALCLAAS VDAATDPESE QLRKSLPKIG
201: KLLKSDGFKA KAALLSAVGS IITAGGAGTK PVLDWLVPVL IEFLSSEDWA ARKSAAEALG KVATAEDLAS QYKKTCTTAL ESRRFDKVKS VRETMNRALN
301: LWKEVSTDDE ASLSPSRSST DDGNIGCFSS VTRSSTIDVG LKSARPKKVT PIMKRSPSLP VNRSYAATRQ KENLPKRNQG NMTMLVEEAS SVDNKGPHFT
401: PVKKSSEETE EKANSGGPDI IKHTISEKSR EDSKVSSFGG LRSGSRVAPC SDDGDSVKNC KDDVEESKKD SEELSLIREQ LALIENQQSS LLDLLQKFMG
501: TSQSGIQSLE SRVSGLEMAL DEISCDLAVS NGRVPRNSSG CAGDSCSKLP GTEFLSPKFW RKTEERPRNR NTANEMAAYD QGMRESTDTN NGQRGGSVFQ
601: KRSRRDQFQD CMHTTLQKPT TRLST

Arabidopsis Description

TOR1L4TORTIFOLIA1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.